RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TK2O00142 265 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 GLRA3O75311 464 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 VARSP26640 1264 aaKnown RBP24.52■■□□□ 1.52
TRIM28-204ENST00000594806 RHDQ02161 417 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 IRF8Q02556 426 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 SLBPQ14493 270 aaKnown RBP eCLIP24.52■■□□□ 1.52
TRIM28-204ENST00000594806 RBBP5Q15291 538 aaKnown RBP24.52■■□□□ 1.52
TRIM28-204ENST00000594806 HIST2H2ACQ16777 129 aaPredicted RBP24.52■■□□□ 1.52
TRIM28-204ENST00000594806 HIST2H2AA3Q6FI13 130 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 TMEM214Q6NUQ4 689 aaKnown RBP24.52■■□□□ 1.52
TRIM28-204ENST00000594806 MRPL14Q6P1L8 145 aaKnown RBP24.52■■□□□ 1.52
TRIM28-204ENST00000594806 SH2D5Q6ZV89 423 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 OVCH1Q7RTY7 1134 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 CYP4X1Q8N118 509 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 TMEM151AQ8N4L1 468 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 PTGR2Q8N8N7 351 aaPredicted RBP24.52■■□□□ 1.52
TRIM28-204ENST00000594806 ZNF740Q8NDX6 193 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 OR2W6PQ8NHA6 318 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 NT5CQ8TCD5 201 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 UBE2E3Q969T4 207 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 SLC26A1Q9H2B4 701 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 SPNS1Q9H2V7 528 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 WDR54Q9H977 334 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 TMEM216Q9P0N5 145 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 LGALS13Q9UHV8 139 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 TCFL5Q9UL49 500 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 ASB1Q9Y576 335 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 SLC22A7Q9Y694 548 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 ZZEF1O43149 2961 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 ZFHX4Q86UP3 3567 aa24.52■■□□□ 1.52
TRIM28-204ENST00000594806 WFS1O76024 890 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 EPORP19235 508 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 ITGAXP20702 1163 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 AVPR1BP47901 424 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 SKP1P63208 163 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 CHIT1Q13231 466 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 DOC2AQ14183 400 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 MLIPQ5VWP3 458 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 TEX9Q8N6V9 391 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 CRELD1Q96HD1 420 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 NXT1Q9UKK6 140 aaKnown RBP24.51■■□□□ 1.51
TRIM28-204ENST00000594806 LHX6Q9UPM6 363 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 PLAAQ9Y263 795 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 MRPS18BQ9Y676 258 aaKnown RBP24.51■■□□□ 1.51
TRIM28-204ENST00000594806 CCDC88CQ9P219 2028 aa24.51■■□□□ 1.51
TRIM28-204ENST00000594806 H0YIG0 161 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 NDUFS4O43181 175 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 UGDHO60701 494 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 MED26O95402 600 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 NSA2O95478 260 aaKnown RBP24.5■■□□□ 1.51
TRIM28-204ENST00000594806 ITGB2P05107 769 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 SERPINA6P08185 405 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 HPDP32754 393 aaPredicted RBP24.5■■□□□ 1.51
TRIM28-204ENST00000594806 CRHR1P34998 444 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 NFKB2Q00653 900 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 CDC20Q12834 499 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 DSG2Q14126 1118 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 ANKRD53Q8N9V6 530 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 COL26A1Q96A83 441 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 PHF21BQ96EK2 531 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 SLC22A11Q9NSA0 550 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 GRID1Q9ULK0 1009 aa24.5■■□□□ 1.51
TRIM28-204ENST00000594806 DSPP15924 2871 aaKnown RBP24.49■■□□□ 1.51
TRIM28-204ENST00000594806 LAMA5O15230 3695 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 CCDC151A5D8V7 595 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 E2F3O00716 465 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 NKX2-8O15522 239 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 SBK3P0C264 359 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 OR1D4P47884 311 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 SLC18A2Q05940 514 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 GTF2H2Q13888 395 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 HERC3Q15034 1050 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 UGT8Q16880 541 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 LIPJQ5W064 366 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 GTF2H2CQ6P1K8 395 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 CROCCP2Q86T23 111 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 SLC22A9Q8IVM8 553 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 RUFY1Q96T51 708 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 C1QTNF3Q9BXJ4 246 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 ANKHQ9HCJ1 492 aa24.49■■□□□ 1.51
TRIM28-204ENST00000594806 ANKDD1BA6NHY2 528 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 FOXS1O43638 330 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 PRAMEF4O60810 478 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 CLEC3AO75596 197 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 KLF7O75840 302 aaPredicted RBP24.48■■□□□ 1.51
TRIM28-204ENST00000594806 KRT4P19013 534 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 FBLP22087 321 aaKnown RBP24.48■■□□□ 1.51
TRIM28-204ENST00000594806 EEF1DP29692 281 aaKnown RBP24.48■■□□□ 1.51
TRIM28-204ENST00000594806 SERPINB1P30740 379 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 HNF4AP41235 474 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 CCDC153Q494R4 210 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 PRAMEF9Q5VWM5 478 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 COX15Q7KZN9 410 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 ABHD13Q7L211 337 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 KCT2Q8NC54 265 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 OR2Y1Q8NGV0 311 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 CREB3L4Q8TEY5 395 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 THAP4Q8WY91 577 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 NACC2Q96BF6 587 aa24.48■■□□□ 1.51
TRIM28-204ENST00000594806 MMABQ96EY8 250 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms