RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ISXQ2M1V0 245 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 PTCHD3Q3KNS1 767 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 FBXO48Q5FWF7 155 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 SPDYAQ5MJ70 313 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 THEMIS2Q5TEJ8 643 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 CACHD1Q5VU97 1274 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 METTL21CQ5VZV1 264 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 KANK2Q63ZY3 851 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 SPESP1Q6UW49 350 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 SUSD1Q6UWL2 747 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 ACAD11Q709F0 780 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 RPS27LQ71UM5 84 aaKnown RBP11.41□□□□□ -0.58
DDX39A-219ENST00000592927 TRPM8Q7Z2W7 1104 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 PRSS42Q7Z5A4 293 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 B3GNT8Q7Z7M8 397 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 OR56A3Q8NH54 315 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 ATP6V1E2Q96A05 226 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 ESAMQ96AP7 390 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 RILPQ96NA2 401 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 SLC46A1Q96NT5 459 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 LRRC37BQ96QE4 947 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 OR2A14Q96R47 310 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 MAP3K3Q99759 626 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 CCDC28BQ9BUN5 200 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 SHCBP1LQ9BZQ2 653 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 ATG10Q9H0Y0 220 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 NOL11Q9H8H0 719 aaKnown RBP11.41□□□□□ -0.58
DDX39A-219ENST00000592927 IPPKQ9H8X2 491 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 CCDC177Q9NQR7 707 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-219ENST00000592927 ABCF3Q9NUQ8 709 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 MRGBPQ9NV56 204 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 DNAJC11Q9NVH1 559 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 AKAP7Q9P0M2 348 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-219ENST00000592927 PLEKHB1Q9UF11 243 aaPredicted RBP11.41□□□□□ -0.58
DDX39A-219ENST00000592927 TRPS1Q9UHF7 1281 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 SATB2Q9UPW6 733 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 PCDHB11Q9Y5F2 797 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 FBN2P35556 2912 aa11.41□□□□□ -0.58
DDX39A-219ENST00000592927 RP1P56715 2156 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 A0A1W2PPV9 198 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 OR7A17O14581 309 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 MAP3K7O43318 606 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 KIF1CO43896 1103 aaKnown RBP11.4□□□□□ -0.58
DDX39A-219ENST00000592927 UGDHO60701 494 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 WDR47O94967 919 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 ITGB2P05107 769 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 TSPAN8P19075 237 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 CSTF2P33240 577 aaKnown RBP eCLIP11.4□□□□□ -0.58
DDX39A-219ENST00000592927 ARL4DP49703 201 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 IDH3AP50213 366 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 PDX1P52945 283 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 TBPL1P62380 186 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 PCDH1Q08174 1060 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 SF3A3Q12874 501 aaKnown RBP eCLIP11.4□□□□□ -0.582e-6■■■■■ 31.6
DDX39A-219ENST00000592927 IFT88Q13099 833 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 SLC5A12Q1EHB4 618 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 C18orf21Q32NC0 220 aaPredicted RBP11.4□□□□□ -0.58
DDX39A-219ENST00000592927 GGTA1PQ4G0N0 100 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 C3orf38Q5JPI3 329 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 CAPN13Q6MZZ7 669 aaPredicted RBP11.4□□□□□ -0.58
DDX39A-219ENST00000592927 IGF2-ASQ6U949 168 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 RNF165Q6ZSG1 346 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 MAVSQ7Z434 540 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 MILR1Q7Z6M3 343 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 YTHDF3Q7Z739 585 aaKnown RBP11.4□□□□□ -0.58
DDX39A-219ENST00000592927 PTRH1Q86Y79 214 aaKnown RBP11.4□□□□□ -0.58
DDX39A-219ENST00000592927 LRRC56Q8IYG6 542 aaPredicted RBP11.4□□□□□ -0.58
DDX39A-219ENST00000592927 CARFQ8N187 725 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 RCBTB1Q8NDN9 531 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 AGR3Q8TD06 166 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 MAELQ96JY0 434 aaKnown RBP11.4□□□□□ -0.58
DDX39A-219ENST00000592927 ACAT2Q9BWD1 397 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 TWSG1Q9GZX9 223 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 PCBD2Q9H0N5 130 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 MEAF6Q9HAF1 191 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 C1GALT1Q9NS00 363 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 GPRC5BQ9NZH0 403 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 HEY2Q9UBP5 337 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 TRIM33Q9UPN9 1127 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 ASB1Q9Y576 335 aa11.4□□□□□ -0.58
DDX39A-219ENST00000592927 IGHV5-51A0A0C4DH38 117 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 A0A0J9YY10 115 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 A0A1W2PNU3 283 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-219ENST00000592927 SLC9B1P1A6NJY1 282 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 AGRPO00253 132 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 PPP6CO00743 305 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 PRICKLE3O43900 615 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-219ENST00000592927 DIAPH2O60879 1101 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 VPS4BO75351 444 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 CCNDBP1O95273 360 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 FKBP9O95302 570 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 CLDN9O95484 217 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 ZBTB11O95625 1053 aaPredicted RBP11.39□□□□□ -0.59
DDX39A-219ENST00000592927 SERPINA6P08185 405 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 ANKRD34CP0C6C1 535 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 HGFP14210 728 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 PSMB5P28074 263 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 SERPINB3P29508 390 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 CMPK1P30085 196 aa11.39□□□□□ -0.59
DDX39A-219ENST00000592927 GDF5P43026 501 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms