RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SLC22A11Q9NSA0 550 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 IGSF5Q9NSI5 407 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 GPRC5BQ9NZH0 403 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 CPSF2Q9P2I0 782 aaKnown RBP9.58□□□□□ -0.88
BRCA1-227ENST00000591849 CTSFQ9UBX1 484 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 ZNF180Q9UJW8 692 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 C3orf18Q9UK00 162 aa9.58□□□□□ -0.88
BRCA1-227ENST00000591849 MAST4O15021 2626 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 IQANK1A0A1B0GTG1 560 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 CCDC189A1A4V9 331 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ANKDD1BA6NHY2 528 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 TRIM49D1C9J1S8 452 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 UBXN8O00124 270 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 FFAR3O14843 346 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 GPR42O15529 346 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 TAPBPO15533 448 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 RIPK2O43353 540 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 KLHL41O60662 606 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 KERAO60938 352 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 DNAJB5O75953 348 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 KLHL2O95198 593 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 MED26O95402 600 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ONECUT2O95948 504 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 RBP1P09455 135 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ZGLP1P0C6A0 271 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 FAM153BP0C7A2 387 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 PLA2G2AP14555 144 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 IL1RNP18510 177 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 MMP11P24347 488 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 VARSP26640 1264 aaKnown RBP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 AHRP35869 848 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 GMPRP36959 345 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ARL1P40616 181 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 HNF4AP41235 474 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 SCTRP47872 440 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 SLC6A12P48065 614 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 EMP2P54851 167 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 FOXL2P58012 376 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 REEP5Q00765 189 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 IRF8Q02556 426 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 DLG1Q12959 904 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 LAPTM5Q13571 262 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 PWP1Q13610 501 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 SLBPQ14493 270 aaKnown RBP eCLIP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 HERC3Q15034 1050 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ACAP2Q15057 778 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 PDK4Q16654 411 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ZXDCQ2QGD7 858 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 FAM153CQ494X1 144 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 LACTB2Q53H82 288 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 VWA2Q5GFL6 755 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 PAGE2BQ5JRK9 111 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 COX15Q7KZN9 410 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ABHD13Q7L211 337 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 VN1R4Q7Z5H5 301 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 MRGPREQ86SM8 312 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ISCA2Q86U28 154 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 PTRH1Q86Y79 214 aaKnown RBP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 MYLK4Q86YV6 388 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 APLFQ8IW19 511 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 GSPT2Q8IYD1 628 aaKnown RBP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ZNF843Q8N446 348 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 DTWD1Q8N5C7 304 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 KCT2Q8NC54 265 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 LRRN4CLQ8ND94 238 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ZNF740Q8NDX6 193 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 TTLQ8NG68 377 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 OR4K1Q8NGD4 311 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 UBLCP1Q8WVY7 318 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 FAR2Q96K12 515 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 SLC25A23Q9BV35 468 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 CD244Q9BZW8 370 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 SEMA4CQ9C0C4 833 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 SLC26A1Q9H2B4 701 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ATP13A2Q9NQ11 1180 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 C14orf105Q9NVL8 296 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 P4HTMQ9NXG6 502 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 OPTCQ9UBM4 332 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 ZFP69BQ9UJL9 534 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 PTBP2Q9UKA9 531 aaKnown RBP9.57□□□□□ -0.88
BRCA1-227ENST00000591849 MAP4K5Q9Y4K4 846 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 BOD1L1Q8NFC6 3051 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 SEC16AO15027 2179 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 NAV2Q8IVL1 2488 aa9.57□□□□□ -0.88
BRCA1-227ENST00000591849 H0YIG0 161 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 SGK494L7N484 410 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 MAP2K7O14733 419 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 FOXS1O43638 330 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 ZNF500O60304 480 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 CNOT3O75175 753 aaKnown RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 SMIM24O75264 130 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 KLHL18O94889 574 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 NSA2O95478 260 aaKnown RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 ALDOAP04075 364 aaKnown RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 UMODP07911 640 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 UQCRHP07919 91 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 ITGA3P26006 1051 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 HPDP32754 393 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-227ENST00000591849 GGT5P36269 586 aa9.56□□□□□ -0.88
BRCA1-227ENST00000591849 KCNC1P48547 511 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms