RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ATCAYQ86WG3 371 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 GHDCQ8N2G8 530 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 BCL7CQ8WUZ0 217 aaPredicted RBP14.68□□□□□ -0.06
CIRBP-228ENST00000590347 KLHL15Q96M94 604 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 PPP1R2P1Q96PQ5 205 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 NPY6RQ99463 290 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 TCF25Q9BQ70 676 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 LINC00597Q9H2U6 94 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 PRM3Q9NNZ6 103 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 GJD2Q9UKL4 321 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 HRH3Q9Y5N1 445 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 ACTL7AQ9Y615 435 aa14.68□□□□□ -0.06
CIRBP-228ENST00000590347 GPR39O43194 453 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 NCR1O76036 304 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 PDE9AO76083 593 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 PRR35P0CG20 571 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 SLC2A2P11168 524 aaPredicted RBP14.67□□□□□ -0.06
CIRBP-228ENST00000590347 GKP32189 559 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 HMGCLP35914 325 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 CDKN1CP49918 316 aaPredicted RBP14.67□□□□□ -0.06
CIRBP-228ENST00000590347 VSX2P58304 361 aaPredicted RBP14.67□□□□□ -0.06
CIRBP-228ENST00000590347 ASAH1Q13510 395 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 XKR7Q5GH72 579 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 LRFN4Q6PJG9 635 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 TRILQ7L0X0 811 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 GPRIN1Q7Z2K8 1008 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 KANSL1Q7Z3B3 1105 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 DPP10Q8N608 796 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 LPCAT1Q8NF37 534 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 OR6M1Q8NGM8 313 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 GPR150Q8NGU9 434 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 DNAJA4Q8WW22 397 aaPredicted RBP14.67□□□□□ -0.06
CIRBP-228ENST00000590347 FOPNLQ96NB1 174 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 TSSK3Q96PN8 268 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 PRKD2Q9BZL6 878 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 DPY30Q9C005 99 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 NIPAL2Q9H841 368 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 B3GAT2Q9NPZ5 323 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 IFT46Q9NQC8 304 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 OLA1Q9NTK5 396 aaKnown RBP14.67□□□□□ -0.06
CIRBP-228ENST00000590347 TNPO3Q9Y5L0 923 aaKnown RBP14.67□□□□□ -0.06
CIRBP-228ENST00000590347 CFAP20Q9Y6A4 193 aaKnown RBP14.67□□□□□ -0.06
CIRBP-228ENST00000590347 A3GALT2U3KPV4 340 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 EVPLQ92817 2033 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 LOC105369274A0A096LPK9 316 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 CCL15-CCL14A0A0B4J2E2 113 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 IQCF5A8MTL0 148 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 LZTS3O60299 673 aaPredicted RBP14.67□□□□□ -0.06
CIRBP-228ENST00000590347 AOC2O75106 756 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 RFPL3O75679 317 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 SCELO95171 688 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 MPC2O95563 127 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 C9P02748 559 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 IFNA16P05015 189 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 TRAPPC2P0DI81 140 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 TRAPPC2BP0DI82 140 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 UROSP10746 265 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 AKT1P31749 480 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 ETV6P41212 452 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 INPP1P49441 399 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 SEMA3BQ13214 749 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 IHHQ14623 411 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 CCL15Q16663 113 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 ERICH5Q6P6B1 374 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 EIF3MQ7L2H7 374 aaKnown RBP14.67□□□□□ -0.06
CIRBP-228ENST00000590347 OR4N4Q8N0Y3 316 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 HSH2DQ96JZ2 352 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 B3GALT6Q96L58 329 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 COL21A1Q96P44 957 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 RBCK1Q9BYM8 510 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 PPA2Q9H2U2 334 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 GTF2IRD1Q9UHL9 959 aa14.67□□□□□ -0.06
CIRBP-228ENST00000590347 LINC00862A6NCI5 91 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 RGS11O94810 467 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 SRCP12931 536 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 ARF4P18085 180 aaPredicted RBP14.66□□□□□ -0.06
CIRBP-228ENST00000590347 CXCL3P19876 107 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 RORCP51449 518 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 DSC2Q02487 901 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 Q8N402 240 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 OR9Q2Q8NGE9 314 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 FCGR1BQ92637 280 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 GPR21Q99679 349 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 NIPSNAP1Q9BPW8 284 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 KLHL21Q9UJP4 597 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 MOXD2PA6NHM9 499 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 FAM227AF5H4B4 570 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 TGFB3P10600 412 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 SMPD1P17405 629 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 DNAJA1P31689 397 aaKnown RBP14.66□□□□□ -0.06
CIRBP-228ENST00000590347 HK3P52790 923 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 MBTD1Q05BQ5 628 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 MFSD14CQ5VZR4 134 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 TAGAPQ8N103 731 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 STPG2Q8N412 459 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 SLC5A8Q8N695 610 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 SLC9A7Q96T83 725 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 RTP3Q9BQQ7 232 aa14.66□□□□□ -0.06
CIRBP-228ENST00000590347 GTPBP2Q9BX10 602 aaKnown RBP14.66□□□□□ -0.06
CIRBP-228ENST00000590347 SLC39A8Q9C0K1 460 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms