RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 PDSS2Q86YH6 399 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 CRLF3Q8IUI8 442 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 CAMKVQ8NCB2 501 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 SLC13A3Q8WWT9 602 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 MAGOHBQ96A72 148 aaKnown RBP13.35□□□□□ -0.27
ERCC1-205ENST00000587888 TM4SF19Q96DZ7 209 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 THAP11Q96EK4 314 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 PEX11GQ96HA9 241 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 NDNQ99608 321 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 UTP23Q9BRU9 249 aaKnown RBP13.35□□□□□ -0.27
ERCC1-205ENST00000587888 HES7Q9BYE0 225 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 RBCK1Q9BYM8 510 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 TSPAN10Q9H1Z9 355 aaPredicted RBP13.35□□□□□ -0.27
ERCC1-205ENST00000587888 CHST11Q9NPF2 352 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 IARS2Q9NSE4 1012 aaKnown RBP13.35□□□□□ -0.27
ERCC1-205ENST00000587888 PDE10AQ9Y233 779 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 NAALAD2Q9Y3Q0 740 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 COMMD10Q9Y6G5 202 aa13.35□□□□□ -0.27
ERCC1-205ENST00000587888 CENPEQ02224 2701 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 SCN2AQ99250 2005 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 ZNF860A6NHJ4 632 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 NPIPA5E9PKD4 350 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 SLC19A2O60779 497 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 CCDC175P0C221 793 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 CDH1P12830 882 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 COX6B1P14854 86 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 POU3F2P20265 443 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 AGTR2P50052 363 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 MEF2AQ02078 507 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 ALDH6A1Q02252 535 aaKnown RBP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 OC90Q02509 493 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 NAE1Q13564 534 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 ABRAXAS2Q15018 415 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 OR1C1Q15619 314 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 EXT1Q16394 746 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 C3AR1Q16581 482 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 MEP1AQ16819 746 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 ZNF630Q2M218 657 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 HSP90AA5PQ58FG0 334 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 CAPN13Q6MZZ7 669 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 AGTRAPQ6RW13 159 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 BNC2Q6ZN30 1099 aaPredicted RBP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 ASPGQ86U10 573 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 C17orf64Q86WR6 236 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 PALM2Q8IXS6 379 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 AGGF1Q8N302 714 aaeCLIP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 MCUQ8NE86 351 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 M1APQ8TC57 530 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 CALML6Q8TD86 181 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 MS4A14Q96JA4 679 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 SERPINB12Q96P63 405 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 AARSD1Q9BTE6 412 aaKnown RBP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 PCBD2Q9H0N5 130 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 XAB2Q9HCS7 855 aaKnown RBP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 TRMT6Q9UJA5 497 aaKnown RBP13.34□□□□□ -0.27
ERCC1-205ENST00000587888 TINAGQ9UJW2 476 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 NPIPA1Q9UND3 350 aa13.34□□□□□ -0.27
ERCC1-205ENST00000587888 ZNHIT1O43257 154 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 DNAJB6O75190 326 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 CYC1P08574 325 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 CD46P15529 392 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 EEF1DP29692 281 aaKnown RBP13.33□□□□□ -0.28
ERCC1-205ENST00000587888 GRK3P35626 688 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 OR4D2P58180 307 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 ZXDCQ2QGD7 858 aaPredicted RBP13.33□□□□□ -0.28
ERCC1-205ENST00000587888 UGT3A1Q6NUS8 523 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 PAPD4Q6PIY7 484 aaKnown RBP13.33□□□□□ -0.28
ERCC1-205ENST00000587888 XKRXQ6PP77 449 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 RPTNQ6XPR3 784 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 SPPL2CQ8IUH8 684 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 LMNTD2Q8IXW0 634 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 MDS2Q8NDY4 140 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 TRIM58Q8NG06 486 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 OR5T3Q8NGG3 340 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 MAGED4Q96JG8 741 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 SIGLEC10Q96LC7 697 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 NPAS2Q99743 824 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 CDCP1Q9H5V8 836 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 PARVBQ9HBI1 364 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 MMP25Q9NPA2 562 aa13.33□□□□□ -0.28
ERCC1-205ENST00000587888 GABRR3A8MPY1 467 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 EIF3FO00303 357 aaPredicted RBP13.32□□□□□ -0.28
ERCC1-205ENST00000587888 OR1F1O43749 312 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 B3GALT4O96024 378 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 SERPIND1P05546 499 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 C8GP07360 202 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 HIST1H2AGP0C0S8 130 aaPredicted RBP13.32□□□□□ -0.28
ERCC1-205ENST00000587888 NPPBP16860 134 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 HIST1H2ADP20671 130 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 RGS4P49798 205 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 SMSP52788 366 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 OLR1P78380 273 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 ADORA2A-AS1P86434 159 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 TIAL1Q01085 375 aaKnown RBP eCLIP13.32□□□□□ -0.28
ERCC1-205ENST00000587888 RHAGQ02094 409 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 KRTCAP3Q53RY4 240 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 CCDC137Q6PK04 289 aaKnown RBP13.32□□□□□ -0.28
ERCC1-205ENST00000587888 PAQR3Q6TCH7 311 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 ZNF662Q6ZS27 426 aa13.32□□□□□ -0.28
ERCC1-205ENST00000587888 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms