RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 EDF1O60869 148 aaKnown RBP17.5■□□□□ 0.39
RFFL-211ENST00000584541 CLEC3AO75596 197 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 PDYNP01213 254 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 EIF2S1P05198 315 aaKnown RBP17.5■□□□□ 0.39
RFFL-211ENST00000584541 KITP10721 976 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 FOLR1P15328 257 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 SERPINB3P29508 390 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 VSX2P58304 361 aaPredicted RBP17.5■□□□□ 0.39
RFFL-211ENST00000584541 ARF3P61204 181 aaPredicted RBP17.5■□□□□ 0.39
RFFL-211ENST00000584541 FOXM1Q08050 763 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 RGS1Q08116 209 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 EIF3IQ13347 325 aaKnown RBP17.5■□□□□ 0.39
RFFL-211ENST00000584541 TUBB3Q13509 450 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 PWP1Q13610 501 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 GPR19Q15760 415 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 TCTE1Q5JU00 501 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 FRMPD2BQ6IN97 320 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 WDR75Q8IWA0 830 aaKnown RBP17.5■□□□□ 0.39
RFFL-211ENST00000584541 DDIASQ8IXT1 998 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 GALNT15Q8N3T1 639 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 TWIST2Q8WVJ9 160 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 SLC13A3Q8WWT9 602 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 ADAMTS14Q8WXS8 1223 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 USP7Q93009 1102 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 PRR11Q96HE9 360 aaPredicted RBP17.5■□□□□ 0.39
RFFL-211ENST00000584541 MTERF1Q99551 399 aaKnown RBP17.5■□□□□ 0.39
RFFL-211ENST00000584541 CCT7Q99832 543 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 BRF2Q9HAW0 419 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 FGF21Q9NSA1 209 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 NMRK1Q9NWW6 199 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 VTI1BQ9UEU0 232 aa17.5■□□□□ 0.39
RFFL-211ENST00000584541 MARCOQ9UEW3 520 aaPredicted RBP17.5■□□□□ 0.39
RFFL-211ENST00000584541 PTPRBP23467 1997 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 CCDC187A0A096LP49 1063 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 LOC105369274A0A096LPK9 316 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 LOC102723532A0A0G2JNH3 316 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 AGRPO00253 132 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 FOXE1O00358 373 aaPredicted RBP17.49■□□□□ 0.39
RFFL-211ENST00000584541 SKAP2O75563 359 aaPredicted RBP17.49■□□□□ 0.39
RFFL-211ENST00000584541 HSD3B1P14060 373 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 HSD3B2P26439 372 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 LSP1P33241 339 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 GABRA4P48169 554 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 NEK2P51955 445 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 CLDN6P56747 220 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 CSTF3Q12996 717 aaKnown RBP17.49■□□□□ 0.39
RFFL-211ENST00000584541 IMPG1Q17R60 797 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 TCHHL1Q5QJ38 904 aaPredicted RBP17.49■□□□□ 0.39
RFFL-211ENST00000584541 MANEAQ5SRI9 462 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 BPHLQ86WA6 291 aaPredicted RBP17.49■□□□□ 0.39
RFFL-211ENST00000584541 GPR135Q8IZ08 494 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 OR4N4Q8N0Y3 316 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 CSNK1A1LQ8N752 337 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 GBP7Q8N8V2 638 aaPredicted RBP17.49■□□□□ 0.39
RFFL-211ENST00000584541 OR8K5Q8NH50 307 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 ZNF473Q8WTR7 871 aaKnown RBP17.49■□□□□ 0.39
RFFL-211ENST00000584541 CMTM7Q96FZ5 175 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 CHMP6Q96FZ7 201 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 OR6C1Q96RD1 312 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 CENPKQ9BS16 269 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 DMRT3Q9NQL9 472 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 FARSBQ9NSD9 589 aaKnown RBP17.49■□□□□ 0.39
RFFL-211ENST00000584541 PSD3Q9NYI0 1048 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 DLL3Q9NYJ7 618 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 RARRES3Q9UL19 164 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 DNAJC15Q9Y5T4 150 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 CFAP54Q96N23 3096 aa17.49■□□□□ 0.39
RFFL-211ENST00000584541 SERTM1A2A2V5 107 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 URADA6NGE7 173 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 TRPC5OSA6NMA1 111 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 MAGEB17A8MXT2 336 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 SLC28A1O00337 649 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 HDAC3O15379 428 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 ZSCAN9O15535 394 aaPredicted RBP17.48■□□□□ 0.39
RFFL-211ENST00000584541 OR2B3O76000 313 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 SERPINA6P08185 405 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 PTX3P26022 381 aaPredicted RBP17.48■□□□□ 0.39
RFFL-211ENST00000584541 HTR6P50406 440 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 ITGA1P56199 1179 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 STXBP1P61764 594 aaKnown RBP17.48■□□□□ 0.39
RFFL-211ENST00000584541 RPS13P62277 151 aaKnown RBP17.48■□□□□ 0.39
RFFL-211ENST00000584541 IL11RAQ14626 422 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 ABRAXAS2Q15018 415 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 PDCD2Q16342 344 aaPredicted RBP17.48■□□□□ 0.39
RFFL-211ENST00000584541 UGT3A2Q3SY77 523 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 WASHC2DQ5SRD0 308 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 ADNP2Q6IQ32 1131 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 RNF165Q6ZSG1 346 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 CHSY3Q70JA7 882 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 RAB11FIP2Q7L804 512 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 VN1R4Q7Z5H5 301 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 TTC29Q8NA56 475 aaPredicted RBP17.48■□□□□ 0.39
RFFL-211ENST00000584541 NT5CQ8TCD5 201 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 CREB3L4Q8TEY5 395 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 ZNF501Q96CX3 271 aaPredicted RBP17.48■□□□□ 0.39
RFFL-211ENST00000584541 TM4SF19Q96DZ7 209 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 SERPINI1Q99574 410 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 FGFR1OP2Q9NVK5 253 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 OCIAD1Q9NX40 245 aa17.48■□□□□ 0.39
RFFL-211ENST00000584541 SIDT1Q9NXL6 827 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms