RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 POMT2Q9UKY4 750 aa10.95□□□□□ -0.66
NUP85-224ENST00000583948 RPH3AQ9Y2J0 694 aaPredicted RBP10.95□□□□□ -0.66
NUP85-224ENST00000583948 HS3ST3B1Q9Y662 390 aa10.95□□□□□ -0.66
NUP85-224ENST00000583948 NBEAL1Q6ZS30 2694 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 WDR91A4D1P6 747 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 BTN3A1O00481 513 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 SLC19A2O60779 497 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 SHOX2O60902 331 aaPredicted RBP10.94□□□□□ -0.66
NUP85-224ENST00000583948 C2P06681 752 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 ESRRAP11474 423 aaPredicted RBP10.94□□□□□ -0.66
NUP85-224ENST00000583948 NEFHP12036 1026 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 CRABP2P29373 138 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 FMO4P31512 558 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 LSP1P33241 339 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 CRHR1P34998 444 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 MAGEA12P43365 314 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 TTPAP49638 278 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 PGGT1BP53609 377 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 SLC18A1P54219 525 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 WDR4P57081 412 aaKnown RBP10.94□□□□□ -0.66
NUP85-224ENST00000583948 TAS2R39P59534 338 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 RAB10P61026 200 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 ARG2P78540 354 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 IRF9Q00978 393 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 ZNF460Q14592 562 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 CEBPEQ15744 281 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.94□□□□□ -0.66
NUP85-224ENST00000583948 NKAIN1Q4KMZ8 207 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 KLHL35Q6PF15 583 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 TMEM220Q6QAJ8 160 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 SNX20Q7Z614 316 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 TRAM1L1Q8N609 369 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 SIRT6Q8N6T7 355 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 CCDC63Q8NA47 563 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 PHC3Q8NDX5 983 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 DENND1AQ8TEH3 1009 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 LPGAT1Q92604 370 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 C8orf44Q96CB5 159 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 RMDN2Q96LZ7 410 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 TCF12Q99081 682 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 TTC1Q99614 292 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 OLFM1Q99784 485 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 ENKD1Q9H0I2 346 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 RABEP2Q9H5N1 569 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 EPS8L2Q9H6S3 715 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 IL26Q9NPH9 171 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 DLL4Q9NR61 685 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 PTGFRNQ9P2B2 879 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 CORO1CQ9ULV4 474 aaPredicted RBP10.94□□□□□ -0.66
NUP85-224ENST00000583948 VPS9D1Q9Y2B5 631 aa10.94□□□□□ -0.66
NUP85-224ENST00000583948 COL6A5A8TX70 2615 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 HCFC1P51610 2035 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 A0A087X1B8 175 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 GAPDHSO14556 408 aaPredicted RBP10.93□□□□□ -0.66
NUP85-224ENST00000583948 PPARGP37231 505 aaPredicted RBP10.93□□□□□ -0.66
NUP85-224ENST00000583948 CDKN2DP55273 166 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 DCDP81605 110 aaKnown RBP10.93□□□□□ -0.66
NUP85-224ENST00000583948 HSF1Q00613 529 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 ILF2Q12905 390 aaKnown RBP10.93□□□□□ -0.66
NUP85-224ENST00000583948 DBN1Q16643 649 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 ZDHHC20Q5W0Z9 365 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 ZNF549Q6P9A3 640 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 ISLR2Q6UXK2 745 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 TMEM200AQ86VY9 491 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 AMZ2Q86W34 360 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 SERPINA9Q86WD7 417 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 PRSS58Q8IYP2 241 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 LMNTD1Q8N9Z9 388 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 ARMC2Q8NEN0 867 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 ZNF398Q8TD17 642 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 KCTD4Q8WVF5 259 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 CKAP2Q8WWK9 683 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 SCYL1Q96KG9 808 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 IP6K3Q96PC2 410 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 SPOCK3Q9BQ16 436 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 C19orf43Q9BQ61 176 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 AARSD1Q9BTE6 412 aaKnown RBP10.93□□□□□ -0.66
NUP85-224ENST00000583948 LHPPQ9H008 270 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 FAM107BQ9H098 131 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 ZNF160Q9HCG1 818 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 RAD18Q9NS91 495 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 PSD3Q9NYI0 1048 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 DCDC2Q9UHG0 476 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 GRID1Q9ULK0 1009 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 KLHL20Q9Y2M5 609 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 PLLPQ9Y342 182 aa10.93□□□□□ -0.66
NUP85-224ENST00000583948 INTS1Q8N201 2190 aaKnown RBP10.93□□□□□ -0.66
NUP85-224ENST00000583948 CSPG4Q6UVK1 2322 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 NKX2-6A6NCS4 301 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 VEGFDO43915 354 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 OR1I1O60431 355 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 OR2B3O76000 313 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 SLCO2B1O94956 709 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 GSTA1P08263 222 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 VIMP08670 466 aaKnown RBP10.92□□□□□ -0.66
NUP85-224ENST00000583948 SLC35E2BP0CK96 405 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 ALAS2P22557 587 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 FDXRP22570 491 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 GABRA4P48169 554 aa10.92□□□□□ -0.66
NUP85-224ENST00000583948 MFAP5Q13361 173 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms