RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 FAM20CQ8IXL6 584 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SLC22A15Q8IZD6 547 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SLC34A3Q8N130 599 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ANKS4BQ8N8V4 417 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TTC29Q8NA56 475 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 OR6P1Q8NGX9 317 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CNDP1Q96KN2 507 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 GPR78Q96P69 363 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 TSSK1BQ9BXA7 367 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 IQCGQ9H095 443 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 SLC26A1Q9H2B4 701 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 EPS8L2Q9H6S3 715 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 FBXO6Q9NRD1 293 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CUTCQ9NTM9 273 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ZNF358Q9NW07 568 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 NXT1Q9UKK6 140 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 KLHL20Q9Y2M5 609 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 VWA7Q9Y334 891 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 CSAG2Q9Y5P2 127 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 ANKRD12Q6UB98 2062 aa9.28□□□□□ -0.92
CDK5RAP3-227ENST00000583352 FAM95CA0A1B0GW59 222 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 TARM1B6A8C7 271 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 CD3EAPO15446 510 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 LRRTM2O43300 516 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 OR1I1O60431 355 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 SNNO75324 88 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 WISP3O95389 354 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 TGDSO95455 350 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 ONECUT2O95948 504 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 SLC35E2BP0CK96 405 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 EDN3P14138 238 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 ITGAXP20702 1163 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 CD9P21926 228 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 PPARGP37231 505 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 RAB10P61026 200 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 IRF9Q00978 393 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 HSPA14Q0VDF9 509 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 CDC16Q13042 620 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 SEMA3AQ14563 771 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 ZNF169Q14929 603 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 TLR1Q15399 786 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 CCDC153Q494R4 210 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 FASTKD1Q53R41 847 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 TCTE1Q5JU00 501 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 C1QL3Q5VWW1 255 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 ZNF470Q6ECI4 717 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 AFTPHQ6ULP2 937 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 IGFL2Q6UWQ7 119 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 UNC5DQ6UXZ4 953 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 FAM47EQ6ZV65 393 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 YTHDF3Q7Z739 585 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 LDB1Q86U70 411 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 LCA5Q86VQ0 697 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 CEP97Q8IW35 865 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 DCUN1D3Q8IWE4 304 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 PARP9Q8IXQ6 854 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 OR2L8Q8NGY9 312 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 OR4L1Q8NH43 312 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 CFAP61Q8NHU2 1237 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 GABPB2Q8TAK5 448 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 RAB3IL1Q8TBN0 382 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 GRHL3Q8TE85 626 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 FAR1Q8WVX9 515 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 CCT6BQ92526 530 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 SPSB2Q99619 263 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 MECRQ9BV79 373 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 LHPPQ9H008 270 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 SOX17Q9H6I2 414 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 SEMA3GQ9NS98 782 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 RUVBL2Q9Y230 463 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 OSGIN2Q9Y236 505 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 ARL2BPQ9Y2Y0 163 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 HS3ST3B1Q9Y662 390 aa9.27□□□□□ -0.93
CDK5RAP3-227ENST00000583352 SNRNP200O75643 2136 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 G3V2L1 256 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 E2F3O00716 465 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 PHGDHO43175 533 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 FKBP9O95302 570 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 APOA4P06727 396 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 SBK3P0C264 359 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 CPA3P15088 417 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 OGNP20774 298 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 CCR7P32248 378 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 GRIA3P42263 894 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 PGGT1BP53609 377 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 PRAMEP78395 509 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 OCRLQ01968 901 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 BST1Q10588 318 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 SF3A3Q12874 501 aaKnown RBP eCLIP9.26□□□□□ -0.931e-6■■□□□ 14.1
CDK5RAP3-227ENST00000583352 DLG1Q12959 904 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 STX3Q13277 289 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 SF1Q15637 639 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 TYSND1Q2T9J0 566 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 FAM214AQ32MH5 1076 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 RBM20Q5T481 1227 aaKnown RBP9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 HECTD2Q5U5R9 776 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 ATG16L1Q676U5 607 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 FCRL6Q6DN72 434 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 ZNF549Q6P9A3 640 aa9.26□□□□□ -0.93
CDK5RAP3-227ENST00000583352 TTC23LQ6PF05 361 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms