RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 FAM92BQ6ZTR7 304 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 USP53Q70EK8 1073 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 CHSY3Q70JA7 882 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 VN1R5Q7Z5H4 357 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 GLRX5Q86SX6 157 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 PIP4P1Q86T03 277 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 PARP9Q8IXQ6 854 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC57-216ENST00000582885 CACNA2D3Q8IZS8 1091 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 DNAJC22Q8N4W6 341 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 OR2T11Q8NH01 316 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 CREB3L4Q8TEY5 395 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 KLHL6Q8WZ60 621 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 TUBGCP3Q96CW5 907 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 MTFMTQ96DP5 389 aaKnown RBP11.49□□□□□ -0.57
CCDC57-216ENST00000582885 TM4SF19Q96DZ7 209 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 CMTM7Q96FZ5 175 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 PPM1MQ96MI6 270 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 RILPQ96NA2 401 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 OR2A5Q96R48 311 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 OR52B2Q96RD2 323 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 MTERF1Q99551 399 aaKnown RBP11.49□□□□□ -0.57
CCDC57-216ENST00000582885 ZFYVE21Q9BQ24 234 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 MS4A8Q9BY19 250 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 ACPTQ9BZG2 426 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 WDR55Q9H6Y2 383 aaPredicted RBP11.49□□□□□ -0.57
CCDC57-216ENST00000582885 AKTIPQ9H8T0 292 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 ENAMQ9NRM1 1142 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 MRGBPQ9NV56 204 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 SIRT5Q9NXA8 310 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.49□□□□□ -0.57
CCDC57-216ENST00000582885 VPS29Q9UBQ0 182 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 KLHL20Q9Y2M5 609 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 PTGDR2Q9Y5Y4 395 aa11.49□□□□□ -0.57
CCDC57-216ENST00000582885 IGHV5-51A0A0C4DH38 117 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 ATP6AP2A0A1C7CYW4 349 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 KIF1CO43896 1103 aaKnown RBP11.48□□□□□ -0.57
CCDC57-216ENST00000582885 NRP2O60462 931 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 SRPX2O60687 465 aaPredicted RBP11.48□□□□□ -0.57
CCDC57-216ENST00000582885 ATP6AP2O75787 350 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 SERPINA6P08185 405 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
CCDC57-216ENST00000582885 ACPPP15309 386 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 LBPP18428 481 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 ACADVLP49748 655 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 RPS13P62277 151 aaKnown RBP11.48□□□□□ -0.57
CCDC57-216ENST00000582885 HSD11B2P80365 405 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 E2F1Q01094 437 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 NHLH1Q02575 133 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 DDX39BQ13838 428 aaKnown RBP11.48□□□□□ -0.57
CCDC57-216ENST00000582885 NR6A1Q15406 480 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 ADPRMQ3LIE5 342 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 LSM12Q3MHD2 195 aaKnown RBP11.48□□□□□ -0.57
CCDC57-216ENST00000582885 ATP6AP1LQ52LC2 224 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 TMEM35AQ53FP2 167 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 C6orf136Q5SQH8 315 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 DEPDC1Q5TB30 811 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 FAM219BQ5XKK7 198 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 ADNP2Q6IQ32 1131 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 ZNF574Q6ZN55 896 aaPredicted RBP11.48□□□□□ -0.57
CCDC57-216ENST00000582885 SPATA19Q7Z5L4 167 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 ZFAND4Q86XD8 727 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 PLD3Q8IV08 490 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 NT5CQ8TCD5 201 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 SLC41A2Q96JW4 573 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 GFM1Q96RP9 751 aaKnown RBP11.48□□□□□ -0.57
CCDC57-216ENST00000582885 HBEGFQ99075 208 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 NUDT22Q9BRQ3 303 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 ZNF768Q9H5H4 540 aaKnown RBP11.48□□□□□ -0.57
CCDC57-216ENST00000582885 PDE7BQ9NP56 450 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 C1orf109Q9NX04 203 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 TRIM33Q9UPN9 1127 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 TMED5Q9Y3A6 229 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 PCDHGA1Q9Y5H4 931 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 KIF26BQ2KJY2 2108 aa11.48□□□□□ -0.57
CCDC57-216ENST00000582885 GVINP1Q7Z2Y8 2422 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 GOLGA8QA0A0J9YX86 632 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 GOLGA8OA6NCC3 632 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 LRIT2A6NDA9 550 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 GOLGA8NF8WBI6 632 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 TXNDC9O14530 226 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 GDF9O60383 454 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 CCDC22O60826 627 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 DCTN3O75935 186 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 TBX6O95947 436 aaPredicted RBP11.47□□□□□ -0.57
CCDC57-216ENST00000582885 THRAP10827 490 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 CDK4P11802 303 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 NELFEP18615 380 aaKnown RBP11.47□□□□□ -0.57
CCDC57-216ENST00000582885 GABRA4P48169 554 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 MRPL19P49406 292 aaKnown RBP11.47□□□□□ -0.57
CCDC57-216ENST00000582885 ERVK-8P63133 956 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 HMGCS1Q01581 520 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 EMX2Q04743 252 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 HYAL2Q12891 473 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 MAD2L1Q13257 205 aaPredicted RBP11.47□□□□□ -0.57
CCDC57-216ENST00000582885 TRA2AQ13595 282 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCDC57-216ENST00000582885 KIAA0040Q15053 153 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 AP5B1Q2VPB7 878 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 SPIN4Q56A73 249 aa11.47□□□□□ -0.57
CCDC57-216ENST00000582885 TMTC4Q5T4D3 741 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms