RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 STARD5Q9NSY2 213 aa9.45□□□□□ -0.9
GGA3-209ENST00000580646 CUEDC1Q9NWM3 386 aaPredicted RBP9.45□□□□□ -0.9
GGA3-209ENST00000580646 CPSF2Q9P2I0 782 aaKnown RBP9.45□□□□□ -0.9
GGA3-209ENST00000580646 OPTCQ9UBM4 332 aa9.45□□□□□ -0.9
GGA3-209ENST00000580646 KCND3Q9UK17 655 aa9.45□□□□□ -0.9
GGA3-209ENST00000580646 EMCNQ9ULC0 261 aa9.45□□□□□ -0.9
GGA3-209ENST00000580646 SH2B3Q9UQQ2 575 aa9.45□□□□□ -0.9
GGA3-209ENST00000580646 AP1M2Q9Y6Q5 423 aa9.45□□□□□ -0.9
GGA3-209ENST00000580646 TRBC2A0A5B9 178 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 GOLGA6L10A6NI86 522 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 A8MT66 165 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 E2F3O00716 465 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 TYROBPO43914 113 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 CCNT2O60583 730 aaKnown RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 PLIN3O60664 434 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 CPNE3O75131 537 aaKnown RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 SCRG1O75711 98 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 PROCP04070 461 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 RPS17P08708 135 aaKnown RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 CDH1P12830 882 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 EPB42P16452 691 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 ATP5F1P24539 256 aaPredicted RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 AHRP35869 848 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 GDF5P43026 501 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 ARSFP54793 590 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 POLE2P56282 527 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 YBX1P67809 324 aaKnown RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 REEP5Q00765 189 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 LAPTM5Q13571 262 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 DNASE1L3Q13609 305 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 ZSCAN26Q16670 478 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 DEFB109BQ30KR1 87 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 C18orf21Q32NC0 220 aaPredicted RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 ATP1A1-AS1Q5TC04 95 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 SLCO4C1Q6ZQN7 724 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 HDXQ7Z353 690 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 TMEM126BQ8IUX1 230 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 MCATQ8IVS2 390 aaKnown RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 SRRM1Q8IYB3 904 aaKnown RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 C10orf67Q8IYJ2 551 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 C4orf33Q8N1A6 199 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 PTGR2Q8N8N7 351 aaPredicted RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 TTLQ8NG68 377 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 OR1L3Q8NH93 324 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 CT55Q8WUE5 264 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 N4BP2L2Q92802 583 aaPredicted RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 L3HYPDHQ96EM0 354 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 PTCD3Q96EY7 689 aaKnown RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 MAGEB10Q96LZ2 347 aaPredicted RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 DPH2Q9BQC3 489 aaPredicted RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 SELENOSQ9BQE4 189 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 AIF1LQ9BQI0 150 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 EFCAB11Q9BUY7 163 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 IQCGQ9H095 443 aaKnown RBP9.44□□□□□ -0.9
GGA3-209ENST00000580646 SRPK3Q9UPE1 567 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 KLHL20Q9Y2M5 609 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 PLLPQ9Y342 182 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 PCDHGA6Q9Y5G7 932 aa9.44□□□□□ -0.9
GGA3-209ENST00000580646 A0A0J9YVX5 310 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 FOXO6A8MYZ6 492 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 C21orf140B9A014 251 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 G3V2L1 256 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 H3BQF6 201 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 HAT1O14929 419 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 ZSCAN9O15535 394 aaPredicted RBP9.43□□□□□ -0.9
GGA3-209ENST00000580646 PRPF4O43172 522 aaKnown RBP eCLIP9.43□□□□□ -0.9
GGA3-209ENST00000580646 HCRTR1O43613 425 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 DLX3O60479 287 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 H2AFYO75367 372 aaKnown RBP9.43□□□□□ -0.9
GGA3-209ENST00000580646 CREG1O75629 220 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 OR2B3O76000 313 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 WFS1O76024 890 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 RECKO95980 971 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 C1GALT1C1LP0DN25 315 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 EPORP19235 508 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 IMPDH1P20839 514 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 SCTRP47872 440 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 AGTR2P50052 363 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 SLC18A1P54219 525 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 PRKAA2P54646 552 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 DNAJB13P59910 316 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 HERVK_113P63132 956 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 IRX1P78414 480 aaPredicted RBP9.43□□□□□ -0.9
GGA3-209ENST00000580646 KCNAB2Q13303 367 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 GTF2H2Q13888 395 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 ERV3-1Q14264 604 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 GRM7Q14831 915 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 DEFB110Q30KQ9 67 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 FAM214AQ32MH5 1076 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 PAGE2BQ5JRK9 111 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 PRAMEF17Q5VTA0 474 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 GARNL3Q5VVW2 1013 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 LIPJQ5W064 366 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 RHBDD2Q6NTF9 364 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 GTF2H2CQ6P1K8 395 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 FAM199XQ6PEV8 388 aaPredicted RBP9.43□□□□□ -0.9
GGA3-209ENST00000580646 ZYG11AQ6WRX3 759 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 ADCK2Q7Z695 626 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 TMPRSS11BQ86T26 416 aa9.43□□□□□ -0.9
GGA3-209ENST00000580646 EXOC3L1Q86VI1 746 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms