RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 RGS1Q08116 209 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 LCP2Q13094 533 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 TRAF3Q13114 568 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 PWP1Q13610 501 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 MPP2Q14168 576 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 NDUFA9Q16795 377 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 HKDC1Q2TB90 917 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 PRTGQ2VWP7 1150 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 GGTA1PQ4G0N0 100 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 MANEAQ5SRI9 462 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 HHATQ5VTY9 493 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 GARNL3Q5VVW2 1013 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 FRMD7Q6ZUT3 714 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 NUDCD3Q8IVD9 361 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 L3MBTL4Q8NA19 623 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 OR4F6Q8NGB9 312 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 PPP1R14CQ8TAE6 165 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 RNF31Q96EP0 1072 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 CDK15Q96Q40 435 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 ZNF382Q96SR6 550 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 PAIP2Q9BPZ3 127 aaKnown RBP13.34□□□□□ -0.27
RPAIN-217ENST00000575711 GATA5Q9BWX5 397 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-217ENST00000575711 TMEM121BQ9BXQ6 578 aaPredicted RBP13.34□□□□□ -0.27
RPAIN-217ENST00000575711 CUTCQ9NTM9 273 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 TXLNGQ9NUQ3 528 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 DKK4Q9UBT3 224 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 RUVBL1Q9Y265 456 aaKnown RBP13.34□□□□□ -0.27
RPAIN-217ENST00000575711 RNF11Q9Y3C5 154 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 PCDHGA11Q9Y5H2 935 aa13.34□□□□□ -0.27
RPAIN-217ENST00000575711 CACNA1AO00555 2505 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 WDR91A4D1P6 747 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-217ENST00000575711 H0YIV9 168 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 H3BQF6 201 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 PPP6CO00743 305 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 DYNC1I1O14576 645 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 P2RX6O15547 441 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 DLGAP3O95886 979 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 DHRS4L1P0CG22 281 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 PCNAP12004 261 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 NEFHP12036 1026 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 SERPINB1P30740 379 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 PKNOX1P55347 436 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 PCBP4P57723 403 aaKnown RBP13.33□□□□□ -0.28
RPAIN-217ENST00000575711 PHEXP78562 749 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 MAP7Q14244 749 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 CPSF6Q16630 551 aaKnown RBP eCLIP13.33□□□□□ -0.28
RPAIN-217ENST00000575711 MUM1Q2TAK8 710 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 RHBDD2Q6NTF9 364 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 C6orf15Q6UXA7 325 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-217ENST00000575711 UNQ6494/PRO21346Q6UXR6 183 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 GPRIN3Q6ZVF9 776 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 ZFAND4Q86XD8 727 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 LAS2Q8IYD9 372 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 NLGN4XQ8N0W4 816 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 ESX1Q8N693 406 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 GALNT6Q8NCL4 622 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 NLGN4YQ8NFZ3 816 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-217ENST00000575711 NT5CQ8TCD5 201 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 PROKR1Q8TCW9 393 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 MGARPQ8TDB4 240 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 CCT6BQ92526 530 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 FGF11Q92914 225 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 TM4SF19Q96DZ7 209 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 CNDP1Q96KN2 507 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 LRFN5Q96NI6 719 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 MACROD1Q9BQ69 325 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 TRMOQ9BU70 441 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 RHBGQ9H310 441 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 MLXIPLQ9NP71 852 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 TRPS1Q9UHF7 1281 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 ADGRE2Q9UHX3 823 aa13.33□□□□□ -0.28
RPAIN-217ENST00000575711 ZNF490Q9ULM2 529 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-217ENST00000575711 A0A1B0GX78 115 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 URADA6NGE7 173 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 C1QTNF9BB2RNN3 333 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 DSCR3O14972 297 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 NPHS1O60500 1241 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 RAD1O60671 282 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 CLEC3AO75596 197 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 OR4F21O95013 312 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 KLK3P07288 261 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-217ENST00000575711 SERPINA6P08185 405 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 CCNYL3P0C7X3 344 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 C1QTNF9P0C862 333 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 LIPCP11150 499 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 AGXTP21549 392 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 ALAS2P22557 587 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 SERPINB5P36952 375 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 GCGRP47871 477 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 ZRSR2Q15696 482 aaKnown RBP13.32□□□□□ -0.28
RPAIN-217ENST00000575711 HSP90B2PQ58FF3 399 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 TTC19Q6DKK2 380 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-217ENST00000575711 LETMD1Q6P1Q0 360 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 ZCCHC23Q6ZST2 131 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 TTLL10Q6ZVT0 673 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 SYVN1Q86TM6 617 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 SLC38A9Q8NBW4 561 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 OR7G3Q8NG95 312 aa13.32□□□□□ -0.28
RPAIN-217ENST00000575711 CREB3L4Q8TEY5 395 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms