RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 GDPD3Q7L5L3 318 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 AKAP14Q86UN6 197 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 ZSWIM9Q86XI8 627 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 FAM217AQ8IXS0 508 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 KLHDC8BQ8IXV7 354 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 NXPE1Q8N323 547 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 ZNF614Q8N883 585 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 MCFD2Q8NI22 146 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 KCNJ9Q92806 393 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 NELL1Q92832 810 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 YIPF6Q96EC8 236 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 PRRG3Q9BZD7 231 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 RMND5AQ9H871 391 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 TRIM39Q9HCM9 518 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 DOCK4Q8N1I0 1966 aa8.25□□□□□ -1.09
RPAIN-215ENST00000575112 PATJQ8NI35 1801 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 DSCR3O14972 297 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 MFN2O95140 757 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 TSPAN12O95859 305 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 GADD45AP24522 165 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 KRT20P35900 424 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 SEC13P55735 322 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CREMQ03060 361 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CAMK2BQ13554 666 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CAMK2GQ13555 558 aaPredicted RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 IRAK1BP1Q5VVH5 260 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 TERB1Q8NA31 727 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 PIK3C3Q8NEB9 887 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 RHOXF1Q8NHV9 184 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 RAB8BQ92930 207 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 ZNF486Q96H40 463 aaPredicted RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CDK5RAP1Q96SZ6 601 aaKnown RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 P2RY13Q9BPV8 354 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 TMEM106CQ9BVX2 250 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CD244Q9BZW8 370 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 OR51E2Q9H255 320 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 XKR8Q9H6D3 395 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 NEK6Q9HC98 313 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 IMP3Q9NV31 184 aaKnown RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 TMEM184CQ9NVA4 438 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 ARID1AO14497 2285 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 H3BM21 787 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CLIC1O00299 241 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 OR7A17O14581 309 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 PCDHGA12O60330 932 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 EPOP01588 193 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CCL5P13501 91 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 ITIH1P19827 911 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CXCR2P25025 360 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 SERPINB1P30740 379 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 HOXA9P31269 272 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 HMGCLP35914 325 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CTSCP53634 463 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 SLC35A2P78381 396 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 ZNF33AQ06730 810 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 C2orf80Q0P641 193 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 HSPB3Q12988 150 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 Q5BKY6 102 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 KLHL17Q6TDP4 642 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 GALNT13Q8IUC8 556 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 GTF2H4Q92759 462 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 KAT2AQ92830 837 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 EXOSC8Q96B26 276 aaKnown RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 NACC2Q96BF6 587 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 VMP1Q96GC9 406 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CNDP2Q96KP4 475 aaKnown RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 TTYH2Q9BSA4 534 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 BRINP2Q9C0B6 783 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 DCSTAMPQ9H295 470 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 MRM3Q9HC36 420 aaKnown RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 DNAJC11Q9NVH1 559 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 NUDT4Q9NZJ9 180 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 TBC1D14Q9P2M4 693 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 DICER1Q9UPY3 1922 aaKnown RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 SPTBN2O15020 2390 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 TLL1O43897 1013 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 VPS4BO75351 444 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 RPS17P08708 135 aaKnown RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CASP3P42574 277 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CDH12P55289 794 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 TRIM71Q2Q1W2 868 aaKnown RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 MPPE1Q53F39 396 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 USP39Q53GS9 565 aaKnown RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CCBE1Q6UXH8 406 aaPredicted RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CCDC103Q8IW40 242 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 METTL4Q8N3J2 472 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 ZNF740Q8NDX6 193 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 DNASE1L2Q92874 299 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 ZHX1-C8orf76Q96EF9 292 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 ARSGQ96EG1 525 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CEP19Q96LK0 163 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 CENPOQ9BU64 300 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 WDR12Q9GZL7 423 aaKnown RBP8.24□□□□□ -1.09
RPAIN-215ENST00000575112 ACOT13Q9NPJ3 140 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 ADPRHL2Q9NX46 363 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 KCTD5Q9NXV2 234 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 LHX3Q9UBR4 397 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 TRIOBPQ9H2D6 2365 aa8.24□□□□□ -1.09
RPAIN-215ENST00000575112 GREB1Q4ZG55 1949 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms