RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 OPTCQ9UBM4 332 aa15.06■□□□□ 0
CHD3-215ENST00000572750 MRPS2Q9Y399 296 aaKnown RBP15.06■□□□□ 0
CHD3-215ENST00000572750 SPTAN1Q13813 2472 aaKnown RBP15.06■□□□□ 0
CHD3-215ENST00000572750 KCNE1BA0A087WTH5 132 aa15.05■□□□□ -0
CHD3-215ENST00000572750 TLDC2A0PJX2 215 aa15.05■□□□□ -0
CHD3-215ENST00000572750 C9J4A7 227 aa15.05■□□□□ -0
CHD3-215ENST00000572750 K7EPI3 171 aa15.05■□□□□ -0
CHD3-215ENST00000572750 KLK8O60259 260 aa15.05■□□□□ -0
CHD3-215ENST00000572750 PRAMEF4O60810 478 aa15.05■□□□□ -0
CHD3-215ENST00000572750 SIX3O95343 332 aaPredicted RBP15.05■□□□□ -0
CHD3-215ENST00000572750 OR1D4P47884 311 aa15.05■□□□□ -0
CHD3-215ENST00000572750 FOXL2P58012 376 aa15.05■□□□□ -0
CHD3-215ENST00000572750 DCDP81605 110 aaKnown RBP15.05■□□□□ -0
CHD3-215ENST00000572750 MUM1Q2TAK8 710 aa15.05■□□□□ -0
CHD3-215ENST00000572750 NKAIN1Q4KMZ8 207 aa15.05■□□□□ -0
CHD3-215ENST00000572750 PRAMEF9Q5VWM5 478 aa15.05■□□□□ -0
CHD3-215ENST00000572750 ATG9BQ674R7 924 aa15.05■□□□□ -0
CHD3-215ENST00000572750 C16orf46Q6P387 395 aa15.05■□□□□ -0
CHD3-215ENST00000572750 COX15Q7KZN9 410 aa15.05■□□□□ -0
CHD3-215ENST00000572750 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.05■□□□□ -0
CHD3-215ENST00000572750 ARHGEF39Q8N4T4 335 aa15.05■□□□□ -0
CHD3-215ENST00000572750 ZSCAN1Q8NBB4 408 aa15.05■□□□□ -0
CHD3-215ENST00000572750 ZCCHC10Q8TBK6 192 aa15.05■□□□□ -0
CHD3-215ENST00000572750 ACMSDQ8TDX5 336 aa15.05■□□□□ -0
CHD3-215ENST00000572750 MOCOSQ96EN8 888 aa15.05■□□□□ -0
CHD3-215ENST00000572750 MRPL57Q9BQC6 102 aaKnown RBP15.05■□□□□ -0
CHD3-215ENST00000572750 EFHD1Q9BUP0 239 aa15.05■□□□□ -0
CHD3-215ENST00000572750 SLC22A11Q9NSA0 550 aa15.05■□□□□ -0
CHD3-215ENST00000572750 GEMIN8Q9NWZ8 242 aaKnown RBP15.05■□□□□ -0
CHD3-215ENST00000572750 TMEM216Q9P0N5 145 aa15.05■□□□□ -0
CHD3-215ENST00000572750 IFT80Q9P2H3 777 aaPredicted RBP15.05■□□□□ -0
CHD3-215ENST00000572750 KCND3Q9UK17 655 aa15.05■□□□□ -0
CHD3-215ENST00000572750 PLAAQ9Y263 795 aa15.05■□□□□ -0
CHD3-215ENST00000572750 PCDHGA6Q9Y5G7 932 aa15.05■□□□□ -0
CHD3-215ENST00000572750 MAU2Q9Y6X3 613 aa15.05■□□□□ -0
CHD3-215ENST00000572750 NOTCH2Q04721 2471 aa15.04■□□□□ -0
CHD3-215ENST00000572750 SEC16AO15027 2179 aa15.04■□□□□ -0
CHD3-215ENST00000572750 ZNF891A8MT65 544 aaPredicted RBP15.04■□□□□ -0
CHD3-215ENST00000572750 CLGNO14967 610 aa15.04■□□□□ -0
CHD3-215ENST00000572750 NKX2-8O15522 239 aa15.04■□□□□ -0
CHD3-215ENST00000572750 SMIM24O75264 130 aa15.04■□□□□ -0
CHD3-215ENST00000572750 SERPIND1P05546 499 aa15.04■□□□□ -0
CHD3-215ENST00000572750 SBK3P0C264 359 aa15.04■□□□□ -0
CHD3-215ENST00000572750 SLC35G6P0C7Q6 338 aa15.04■□□□□ -0
CHD3-215ENST00000572750 C1GALT1C1LP0DN25 315 aa15.04■□□□□ -0
CHD3-215ENST00000572750 CD22P20273 847 aa15.04■□□□□ -0
CHD3-215ENST00000572750 PTPN4P29074 926 aa15.04■□□□□ -0
CHD3-215ENST00000572750 EEF1DP29692 281 aaKnown RBP15.04■□□□□ -0
CHD3-215ENST00000572750 SCTRP47872 440 aa15.04■□□□□ -0
CHD3-215ENST00000572750 RPS15P62841 145 aaKnown RBP15.04■□□□□ -0
CHD3-215ENST00000572750 CDC20Q12834 499 aa15.04■□□□□ -0
CHD3-215ENST00000572750 IL10RAQ13651 578 aa15.04■□□□□ -0
CHD3-215ENST00000572750 RASA2Q15283 850 aa15.04■□□□□ -0
CHD3-215ENST00000572750 FAM214AQ32MH5 1076 aa15.04■□□□□ -0
CHD3-215ENST00000572750 XKR6Q5GH73 641 aa15.04■□□□□ -0
CHD3-215ENST00000572750 MLIPQ5VWP3 458 aa15.04■□□□□ -0
CHD3-215ENST00000572750 ADNP2Q6IQ32 1131 aa15.04■□□□□ -0
CHD3-215ENST00000572750 TBC1D19Q8N5T2 526 aa15.04■□□□□ -0
CHD3-215ENST00000572750 TEX9Q8N6V9 391 aa15.04■□□□□ -0
CHD3-215ENST00000572750 ANKRD53Q8N9V6 530 aa15.04■□□□□ -0
CHD3-215ENST00000572750 KCT2Q8NC54 265 aa15.04■□□□□ -0
CHD3-215ENST00000572750 SLC13A3Q8WWT9 602 aa15.04■□□□□ -0
CHD3-215ENST00000572750 PHF21BQ96EK2 531 aa15.04■□□□□ -0
CHD3-215ENST00000572750 THAP11Q96EK4 314 aa15.04■□□□□ -0
CHD3-215ENST00000572750 SARGQ9BW04 601 aa15.04■□□□□ -0
CHD3-215ENST00000572750 NLNQ9BYT8 704 aa15.04■□□□□ -0
CHD3-215ENST00000572750 DRC3Q9H069 523 aa15.04■□□□□ -0
CHD3-215ENST00000572750 CTSFQ9UBX1 484 aa15.04■□□□□ -0
CHD3-215ENST00000572750 CCDC88CQ9P219 2028 aa15.04■□□□□ -0
CHD3-215ENST00000572750 A0A0A6YYC8 382 aaPredicted RBP15.03■□□□□ -0
CHD3-215ENST00000572750 A8MT66 165 aa15.03■□□□□ -0
CHD3-215ENST00000572750 I3L1I5 382 aaPredicted RBP15.03■□□□□ -0
CHD3-215ENST00000572750 TXNDC9O14530 226 aa15.03■□□□□ -0
CHD3-215ENST00000572750 FFAR3O14843 346 aa15.03■□□□□ -0
CHD3-215ENST00000572750 GPR42O15529 346 aa15.03■□□□□ -0
CHD3-215ENST00000572750 SLC28A2O43868 658 aa15.03■□□□□ -0
CHD3-215ENST00000572750 CNOT3O75175 753 aaKnown RBP15.03■□□□□ -0
CHD3-215ENST00000572750 TUBBP07437 444 aa15.03■□□□□ -0
CHD3-215ENST00000572750 RAB40ALP0C0E4 278 aa15.03■□□□□ -0
CHD3-215ENST00000572750 EMP3P54852 163 aa15.03■□□□□ -0
CHD3-215ENST00000572750 DOC2AQ14183 400 aa15.03■□□□□ -0
CHD3-215ENST00000572750 RBBP5Q15291 538 aaKnown RBP15.03■□□□□ -0
CHD3-215ENST00000572750 TMEM214Q6NUQ4 689 aaKnown RBP15.03■□□□□ -0
CHD3-215ENST00000572750 PRSS41Q7RTY9 318 aa15.03■□□□□ -0
CHD3-215ENST00000572750 TMEM151BQ8IW70 566 aa15.03■□□□□ -0
CHD3-215ENST00000572750 C4orf33Q8N1A6 199 aa15.03■□□□□ -0
CHD3-215ENST00000572750 RIBC1Q8N443 379 aaPredicted RBP15.03■□□□□ -0
CHD3-215ENST00000572750 TMEM151AQ8N4L1 468 aa15.03■□□□□ -0
CHD3-215ENST00000572750 CAMKVQ8NCB2 501 aa15.03■□□□□ -0
CHD3-215ENST00000572750 SNRNP27Q8WVK2 155 aaKnown RBP15.03■□□□□ -0
CHD3-215ENST00000572750 TM4SF19Q96DZ7 209 aa15.03■□□□□ -0
CHD3-215ENST00000572750 WBP1Q96G27 269 aa15.03■□□□□ -0
CHD3-215ENST00000572750 GPR87Q9BY21 358 aa15.03■□□□□ -0
CHD3-215ENST00000572750 EHD1Q9H4M9 534 aa15.03■□□□□ -0
CHD3-215ENST00000572750 GPN3Q9UHW5 284 aaPredicted RBP15.03■□□□□ -0
CHD3-215ENST00000572750 ZFP69BQ9UJL9 534 aa15.03■□□□□ -0
CHD3-215ENST00000572750 TCFL5Q9UL49 500 aa15.03■□□□□ -0
CHD3-215ENST00000572750 EMCNQ9ULC0 261 aa15.03■□□□□ -0
CHD3-215ENST00000572750 FARSAQ9Y285 508 aaKnown RBP15.03■□□□□ -0
CHD3-215ENST00000572750 ANGPTL3Q9Y5C1 460 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms