RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 SLC38A4Q969I6 547 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 NTMT1Q9BV86 223 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 RIOK2Q9BVS4 552 aaKnown RBP14.79□□□□□ -0.04
USP43-202ENST00000570475 FAM83DQ9H4H8 585 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 DNMT3AQ9Y6K1 912 aaPredicted RBP14.79□□□□□ -0.04
USP43-202ENST00000570475 OTOFQ9HC10 1997 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 GABARAPO95166 117 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 CATP04040 527 aaKnown RBP14.79□□□□□ -0.04
USP43-202ENST00000570475 GSTM1P09488 218 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 PTGER1P34995 402 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 GSTM4Q03013 218 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 KIAA0040Q15053 153 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 DEPDC1Q5TB30 811 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 NPAS4Q8IUM7 802 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 CAMKK1Q8N5S9 505 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 FATE1Q969F0 183 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 SLC35A5Q9BS91 424 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 SERHLQ9NQF3 203 aa14.79□□□□□ -0.04
USP43-202ENST00000570475 TMEM202A6NGA9 273 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 H3BM21 787 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 INPPL1O15357 1258 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 RPLP0P05388 317 aaKnown RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 ATP1B2P14415 290 aaPredicted RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 AMD1P17707 334 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 RYKP34925 604 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 AGTRAPQ6RW13 159 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 ZNF852Q6ZMS4 543 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 CHST9Q7L1S5 443 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 EIF3MQ7L2H7 374 aaKnown RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 CFAP206Q8IYR0 622 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 C7orf57Q8NEG2 295 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 ZNF461Q8TAF7 563 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 RAB8BQ92930 207 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 CIDECQ96AQ7 238 aaPredicted RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 MROQ9BYG7 248 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 SLC29A3Q9BZD2 475 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 EHD1Q9H4M9 534 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 DNAJC27Q9NZQ0 273 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 MOSPD1Q9UJG1 213 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 GABRR3A8MPY1 467 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 CTDSP2O14595 271 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 PPIGQ13427 754 aaKnown RBP eCLIP14.78□□□□□ -0.04
USP43-202ENST00000570475 GPR33Q49SQ1 333 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 DESI1Q6ICB0 168 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 TPRG1Q6ZUI0 275 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 TRIM46Q7Z4K8 759 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 TSPYL5Q86VY4 417 aaPredicted RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 MEX3DQ86XN8 651 aaKnown RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 RNF130Q86XS8 419 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 ENTHD1Q8IYW4 607 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 TCAIMQ8N3R3 496 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 DCAF4L2Q8NA75 395 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 CENPOQ9BU64 300 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 NECTIN3Q9NQS3 549 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 C5AR2Q9P296 337 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 MALT1Q9UDY8 824 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 SLC25A13Q9UJS0 675 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 TMCC3Q9ULS5 477 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 CCL27Q9Y4X3 112 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 CFAP20Q9Y6A4 193 aaKnown RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 KCNE2Q9Y6J6 123 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 TNS1Q9HBL0 1735 aaKnown RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 UNCXA6NJT0 531 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 TSPAN6O43657 245 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 SLC16A8O95907 504 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 LRG1P02750 347 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 TCEA1P23193 301 aaKnown RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 AOAHP28039 575 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 CRISP3P54108 245 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 LEXMQ3ZCV2 418 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 STEAP3Q658P3 488 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 TYW3Q6IPR3 259 aaKnown RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 CCBE1Q6UXH8 406 aaPredicted RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 NANOGNBQ7Z5D8 188 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 ZZZ3Q8IYH5 903 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 PPCDCQ96CD2 204 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 CASD1Q96PB1 797 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 GPBP1L1Q9HC44 474 aaPredicted RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 TIGARQ9NQ88 270 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 RUVBL1Q9Y265 456 aaKnown RBP14.78□□□□□ -0.04
USP43-202ENST00000570475 CNTRLQ7Z7A1 2325 aa14.78□□□□□ -0.04
USP43-202ENST00000570475 KLK1P06870 262 aa14.77□□□□□ -0.04
USP43-202ENST00000570475 PCMT1P22061 227 aa14.77□□□□□ -0.04
USP43-202ENST00000570475 NNMTP40261 264 aa14.77□□□□□ -0.04
USP43-202ENST00000570475 CDC42P60953 191 aa14.77□□□□□ -0.04
USP43-202ENST00000570475 COX20Q5RI15 118 aa14.77□□□□□ -0.04
USP43-202ENST00000570475 AQP11Q8NBQ7 271 aa14.77□□□□□ -0.04
USP43-202ENST00000570475 ATL1Q8WXF7 558 aa14.77□□□□□ -0.04
USP43-202ENST00000570475 PDLIM5Q96HC4 596 aaKnown RBP14.77□□□□□ -0.04
USP43-202ENST00000570475 SORBS1Q9BX66 1292 aaKnown RBP14.77□□□□□ -0.04
USP43-202ENST00000570475 GFRA2O00451 464 aa14.77□□□□□ -0.05
USP43-202ENST00000570475 SLC16A6O15403 523 aa14.77□□□□□ -0.05
USP43-202ENST00000570475 GADD45GO95257 159 aa14.77□□□□□ -0.05
USP43-202ENST00000570475 PPP5CP53041 499 aa14.77□□□□□ -0.05
USP43-202ENST00000570475 RAB15P59190 212 aa14.77□□□□□ -0.05
USP43-202ENST00000570475 SCARB2Q14108 478 aa14.77□□□□□ -0.05
USP43-202ENST00000570475 ATAD3BQ5T9A4 648 aa14.77□□□□□ -0.05
USP43-202ENST00000570475 ERICH5Q6P6B1 374 aa14.77□□□□□ -0.05
USP43-202ENST00000570475 KBTBD8Q8NFY9 601 aa14.77□□□□□ -0.05
USP43-202ENST00000570475 PJA1Q8NG27 643 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms