RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 ITGA8P53708 1063 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 RGS1Q08116 209 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 MGAT5Q09328 741 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 PDIA2Q13087 525 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 HERC3Q15034 1050 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 PHKG1Q16816 387 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 BTBD16Q32M84 506 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 TMEM214Q6NUQ4 689 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 NIPAL1Q6NVV3 410 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 TMEM205Q6UW68 189 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 FRA10AC1Q70Z53 315 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 VN1R4Q7Z5H5 301 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 IGDCC3Q8IVU1 814 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 NKAPQ8N5F7 415 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 MFSD9Q8NBP5 474 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 KCT2Q8NC54 265 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 HAS2Q92819 552 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 PYCR2Q96C36 320 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 VPS39Q96JC1 886 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 ZNF354BQ96LW1 612 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 CYTH2Q99418 400 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 NAPGQ99747 312 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 TRIM51Q9BSJ1 452 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 SGPP1Q9BX95 441 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 VN1R1Q9GZP7 353 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 SYNPO2LQ9H987 977 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 KCNK13Q9HB14 408 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 PRM3Q9NNZ6 103 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 STMN3Q9NZ72 180 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 ABI3Q9P2A4 366 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 TXNDC16Q9P2K2 825 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 SLC17A6Q9P2U8 582 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 ERRFI1Q9UJM3 462 aaPredicted RBP8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 NAALAD2Q9Y3Q0 740 aa8.45□□□□□ -1.06
NPLOC4-204ENST00000570324 LOC102723996A0A087X1L8 192 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 IGHV3-20A0A0C4DH32 117 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 FAM95CA0A1B0GW59 222 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 A0A1W2PQ72 361 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 URADA6NGE7 173 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 LRRTM2O43300 516 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 H2AFYO75367 372 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 RDH16O75452 317 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 JRKO75564 520 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 WDPCPO95876 746 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 CELA2AP08217 269 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 CYC1P08574 325 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 IL10P22301 178 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 TNFSF10P50591 281 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 TAS2R50P59544 299 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 TIAL1Q01085 375 aaKnown RBP eCLIP8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 MEF2AQ02078 507 aaPredicted RBP8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 CALCOCO2Q13137 446 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 PCOLCEQ15113 449 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 NSDHLQ15738 373 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 EXT1Q16394 746 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 HIST2H2BCQ6DN03 193 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 HIBCHQ6NVY1 386 aaPredicted RBP8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 RPUSD3Q6P087 351 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 TRMT10BQ6PF06 316 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 LANCL3Q6ZV70 420 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 ABHD13Q7L211 337 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 PRSS41Q7RTY9 318 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 MAMDC2Q7Z304 686 aaPredicted RBP8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 STRA8Q7Z7C7 330 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 ARHGEF39Q8N4T4 335 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 BBOF1Q8ND07 529 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 FBXO36Q8NEA4 188 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 SLC5A11Q8WWX8 675 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 PSMF1Q92530 271 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 FBXL8Q96CD0 374 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 TM4SF19Q96DZ7 209 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 PEX11GQ96HA9 241 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 PDLIM5Q96HC4 596 aaKnown RBP8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 PWWP2AQ96N64 755 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 KRT12Q99456 494 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 LPAR4Q99677 370 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 KCNF1Q9H3M0 494 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 NSMCE4AQ9NXX6 385 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 RNF14Q9UBS8 474 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 SH2B3Q9UQQ2 575 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 SLC22A7Q9Y694 548 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 TEX264Q9Y6I9 313 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 KCNE2Q9Y6J6 123 aa8.44□□□□□ -1.06
NPLOC4-204ENST00000570324 RP1L1Q8IWN7 2480 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 SCN3AQ9NY46 2000 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 A0A1B0GUH1 482 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 TRBC2A0A5B9 178 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 OR5H15A6NDH6 313 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 ZNF860A6NHJ4 632 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 USP27XA6NNY8 438 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 PSMD12O00232 456 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 CDC123O75794 336 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 SEC31AO94979 1220 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 RASAL1O95294 804 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 LDLRP01130 860 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 CRYABP02511 175 aaKnown RBP8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 TUBB4AP04350 444 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 ALOX12P18054 663 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 JAK1P23458 1154 aa8.43□□□□□ -1.06
NPLOC4-204ENST00000570324 IVDP26440 423 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms