RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 IL17FQ96PD4 163 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 DUSP26Q9BV47 211 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 OR51B5Q9H339 312 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 SPASTQ9UBP0 616 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 C3orf18Q9UK00 162 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 TDRKHQ9Y2W6 561 aaKnown RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 ANAPC1Q9H1A4 1944 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 SZT2Q5T011 3432 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 TRBV5-3A0A0A0MS03 114 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 GABRR3A8MPY1 467 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 FAM220BPB1ANY3 271 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 H3BM21 787 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 J3QRK9 145 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 BCKDKO14874 412 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 MMP20O60882 483 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 ATG13O75143 517 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 MOSPD3O75425 235 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 PTPN6P29350 595 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 ARHGDIAP52565 204 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 ST8SIA6P61647 398 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 ABHD18Q0P651 414 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 CAMK2BQ13554 666 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 SMN1Q16637 294 aaKnown RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 DUOXA1Q1HG43 343 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF773Q6PK81 442 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 CYP4Z1Q86W10 505 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 C12orf40Q86WS4 652 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 DCP2Q8IU60 420 aaKnown RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 ZCCHC7Q8N3Z6 543 aaKnown RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 LEMD2Q8NC56 503 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 CHDHQ8NE62 594 aaPredicted RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 OR5K1Q8NHB7 308 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 HUS1BQ8NHY5 278 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 SPPL2AQ8TCT8 520 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 BTN2A2Q8WVV5 523 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 FBXL8Q96CD0 374 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 HSH2DQ96JZ2 352 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 FOPNLQ96NB1 174 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 LRRC3BQ96PB8 259 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 CFHR5Q9BXR6 569 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 OSBPL6Q9BZF3 934 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 TPT1P8Q9HAU6 139 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 TIMMDC1Q9NPL8 285 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 GALNT8Q9NY28 637 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 ACSL6Q9UKU0 697 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 FZD4Q9ULV1 537 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 SH2B3Q9UQQ2 575 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 SAMHD1Q9Y3Z3 626 aaKnown RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 PLXNA4Q9HCM2 1894 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 TIMP1P01033 207 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 ACPPP15309 386 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 PRPS1L1P21108 318 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 IMPA1P29218 277 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 OR1E2P47887 323 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 DGKGP49619 791 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 PRMT2P55345 433 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 AP1S2P56377 157 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 VMACQ2NL98 169 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 CPTPQ5TA50 214 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 LIPIQ6XZB0 460 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 PARS2Q7L3T8 475 aaKnown RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 OR7G3Q8NG95 312 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 CSGALNACT1Q8TDX6 532 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 REXO5Q96IC2 774 aaKnown RBP8.45□□□□□ -1.06
LINC00558-201ENST00000569422 ARMC7Q9H6L4 198 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 AMBNQ9NP70 447 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 C8orf4Q9NR00 106 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 TMEM45AQ9NWC5 275 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 PPIL1Q9Y3C6 166 aa8.45□□□□□ -1.06
LINC00558-201ENST00000569422 USP34Q70CQ2 3546 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 LZTS3O60299 673 aaPredicted RBP8.44□□□□□ -1.06
LINC00558-201ENST00000569422 KCNK5O95279 499 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 AGR2O95994 175 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 MPC1LP0DKB6 136 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 CEBPBP17676 345 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 KDELR2P33947 212 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 MAP2K4P45985 399 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 GZMMP51124 257 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 DGKEP52429 567 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 RAD23AP54725 363 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 PTPN5P54829 565 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 LRIF1Q5T3J3 769 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 HENMT1Q5T8I9 393 aaKnown RBP8.44□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF852Q6ZMS4 543 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 Q6ZPB1 254 aaPredicted RBP8.44□□□□□ -1.06
LINC00558-201ENST00000569422 SPARTQ8N0X7 666 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF740Q8NDX6 193 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 SORBS1Q9BX66 1292 aaKnown RBP8.44□□□□□ -1.06
LINC00558-201ENST00000569422 CEP44Q9C0F1 390 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 SAMD4AQ9UPU9 718 aaKnown RBP8.44□□□□□ -1.06
LINC00558-201ENST00000569422 A0A0J9YVX5 310 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 WNT9AO14904 365 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 KPNA5O15131 536 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 CCNDBP1O95273 360 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 FABP3P05413 133 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 RETP07949 1114 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 GSTM1P09488 218 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 ZNF30P17039 623 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 CCNA2P20248 432 aa8.44□□□□□ -1.06
LINC00558-201ENST00000569422 GPR1P46091 355 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms