RNA–Protein interactions for RNA: ENST00000567339.1

GGA2-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 3

Gene GGA2, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-210ENST00000567339 CUTCQ9NTM9 273 aa9.42□□□□□ -0.9
GGA2-210ENST00000567339 KCND3Q9UK17 655 aa9.42□□□□□ -0.9
GGA2-210ENST00000567339 PCTPQ9UKL6 214 aa9.42□□□□□ -0.9
GGA2-210ENST00000567339 EMCNQ9ULC0 261 aa9.42□□□□□ -0.9
GGA2-210ENST00000567339 PADI2Q9Y2J8 665 aa9.42□□□□□ -0.9
GGA2-210ENST00000567339 ASB1Q9Y576 335 aa9.42□□□□□ -0.9
GGA2-210ENST00000567339 PCDHGA11Q9Y5H2 935 aa9.42□□□□□ -0.9
GGA2-210ENST00000567339 SLC22A7Q9Y694 548 aa9.42□□□□□ -0.9
GGA2-210ENST00000567339 AKAP13Q12802 2813 aa9.42□□□□□ -0.9
GGA2-210ENST00000567339 URB1O60287 2271 aaKnown RBP9.42□□□□□ -0.9
GGA2-210ENST00000567339 ANKRD11Q6UB99 2663 aaPredicted RBP9.41□□□□□ -0.9
GGA2-210ENST00000567339 A0A088AWK7 358 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 FEZF1A0PJY2 475 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 ANKDD1BA6NHY2 528 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 G3V2L1 256 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 H0YIG0 161 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 H0YIV9 168 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 NDUFS4O43181 175 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 TYROBPO43914 113 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 NRP2O60462 931 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 DLX3O60479 287 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 CLEC3AO75596 197 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 ZWINTO95229 277 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 SIX3O95343 332 aaPredicted RBP9.41□□□□□ -0.9
GGA2-210ENST00000567339 CLDN9O95484 217 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 RECKO95980 971 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 NTRK1P04629 796 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 RAB40ALP0C0E4 278 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 CPA3P15088 417 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 EPORP19235 508 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 ZNF10P21506 573 aaPredicted RBP9.41□□□□□ -0.9
GGA2-210ENST00000567339 VARSP26640 1264 aaKnown RBP9.41□□□□□ -0.9
GGA2-210ENST00000567339 PIK3CBP42338 1070 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 SLC18A1P54219 525 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 STXBP1P61764 594 aaKnown RBP9.41□□□□□ -0.9
GGA2-210ENST00000567339 MC1RQ01726 317 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 TGM3Q08188 693 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 DOC2AQ14183 400 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 RBBP5Q15291 538 aaKnown RBP9.41□□□□□ -0.9
GGA2-210ENST00000567339 FBXO48Q5FWF7 155 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 ZNF678Q5SXM1 525 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 LIPMQ5VYY2 423 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 TMEM214Q6NUQ4 689 aaKnown RBP9.41□□□□□ -0.9
GGA2-210ENST00000567339 MED27Q6P2C8 311 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 C16orf46Q6P387 395 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 ABHD13Q7L211 337 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 SPACA3Q8IXA5 215 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 LAS2Q8IYD9 372 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 GOLGA6L1Q8N7Z2 621 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 ATP6V1E2Q96A05 226 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 ESAMQ96AP7 390 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 GBP5Q96PP8 586 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 CCNL2Q96S94 520 aaPredicted RBP9.41□□□□□ -0.9
GGA2-210ENST00000567339 ZNF382Q96SR6 550 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 CENPKQ9BS16 269 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 TRMOQ9BU70 441 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 OXSMQ9NWU1 459 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 NXT1Q9UKK6 140 aaKnown RBP9.41□□□□□ -0.9
GGA2-210ENST00000567339 PPT2Q9UMR5 302 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 RUVBL1Q9Y265 456 aaKnown RBP9.41□□□□□ -0.9
GGA2-210ENST00000567339 SSUH2Q9Y2M2 353 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 RAXQ9Y2V3 346 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 PCDHGA6Q9Y5G7 932 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 SEC16AO15027 2179 aa9.41□□□□□ -0.9
GGA2-210ENST00000567339 SDK2Q58EX2 2172 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 KLK10O43240 276 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 TRIM13O60858 407 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 SUPT7LO94864 414 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 NSA2O95478 260 aaKnown RBP9.4□□□□□ -0.9
GGA2-210ENST00000567339 ALBP02768 609 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 ENO1P06733 434 aaKnown RBP9.4□□□□□ -0.9
GGA2-210ENST00000567339 ALAS2P22557 587 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 SERPINB5P36952 375 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 ARL1P40616 181 aaPredicted RBP9.4□□□□□ -0.9
GGA2-210ENST00000567339 AVPR1BP47901 424 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 ARFIP1P53367 373 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 PKNOX1P55347 436 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 RPS15P62841 145 aaKnown RBP9.4□□□□□ -0.9
GGA2-210ENST00000567339 MEF2AQ02078 507 aaPredicted RBP9.4□□□□□ -0.9
GGA2-210ENST00000567339 TLE3Q04726 772 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 CLCQ05315 142 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 ZNF33BQ06732 778 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 LCP2Q13094 533 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 GPS2Q13227 327 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 DSG2Q14126 1118 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 NKAIN1Q4KMZ8 207 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 CRTC2Q53ET0 693 aaPredicted RBP9.4□□□□□ -0.9
GGA2-210ENST00000567339 TMEM35AQ53FP2 167 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 CFAP157Q5JU67 520 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 AGBL2Q5U5Z8 902 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 ZNF385CQ66K41 422 aaPredicted RBP9.4□□□□□ -0.9
GGA2-210ENST00000567339 TTLL10Q6ZVT0 673 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 TIPARPQ7Z3E1 657 aaKnown RBP9.4□□□□□ -0.9
GGA2-210ENST00000567339 EXOC3L1Q86VI1 746 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 MYLK4Q86YV6 388 aaPredicted RBP9.4□□□□□ -0.9
GGA2-210ENST00000567339 PLD3Q8IV08 490 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.4□□□□□ -0.92e-9■■■■□ 23.2
GGA2-210ENST00000567339 ARHGEF39Q8N4T4 335 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 ZSCAN1Q8NBB4 408 aa9.4□□□□□ -0.9
GGA2-210ENST00000567339 SLC38A9Q8NBW4 561 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms