RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 C5orf34Q96MH7 638 aa14.35□□□□□ -0.11
CMTM3-212ENST00000566121 VN1R1Q9GZP7 353 aa14.35□□□□□ -0.11
CMTM3-212ENST00000566121 ANKHQ9HCJ1 492 aa14.35□□□□□ -0.11
CMTM3-212ENST00000566121 NSMCE4AQ9NXX6 385 aa14.35□□□□□ -0.11
CMTM3-212ENST00000566121 TSR3Q9UJK0 312 aaKnown RBP14.35□□□□□ -0.11
CMTM3-212ENST00000566121 TRBC2A0A5B9 178 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 LCMT2O60294 686 aaKnown RBP14.34□□□□□ -0.11
CMTM3-212ENST00000566121 SEC31AO94979 1220 aaKnown RBP14.34□□□□□ -0.11
CMTM3-212ENST00000566121 SLC35G6P0C7Q6 338 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 ELK3P41970 407 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 EFNA3P52797 238 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 ARL4CP56559 192 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 CDC16Q13042 620 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 EXT1Q16394 746 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 PHKG1Q16816 387 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.34□□□□□ -0.11
CMTM3-212ENST00000566121 BBS9Q3SYG4 887 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 RBM20Q5T481 1227 aaKnown RBP14.34□□□□□ -0.11
CMTM3-212ENST00000566121 HECTD2Q5U5R9 776 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 MAMDC2Q7Z304 686 aaPredicted RBP14.34□□□□□ -0.11
CMTM3-212ENST00000566121 CPEB2Q7Z5Q1 589 aaKnown RBP14.34□□□□□ -0.11
CMTM3-212ENST00000566121 PLD3Q8IV08 490 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 LGI4Q8N135 537 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 NKAPQ8N5F7 415 aaKnown RBP14.34□□□□□ -0.11
CMTM3-212ENST00000566121 OR9A4Q8NGU2 314 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 NT5CQ8TCD5 201 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 LINGO1Q96FE5 620 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 NDNQ99608 321 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 MESP1Q9BRJ9 268 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 MCMBPQ9BTE3 642 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 KCNF1Q9H3M0 494 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 POPDC3Q9HBV1 291 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 ARL15Q9NXU5 204 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 SAR1BQ9Y6B6 198 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 ABCA12Q86UK0 2595 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 SCN2AQ99250 2005 aa14.34□□□□□ -0.11
CMTM3-212ENST00000566121 GSTM2P28161 218 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 HNMTP50135 292 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 ARG2P78540 354 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 DR1Q01658 176 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 MGAT5Q09328 741 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 PDAP1Q13442 181 aaKnown RBP14.33□□□□□ -0.12
CMTM3-212ENST00000566121 PPP1R3AQ16821 1122 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 CDKL4Q5MAI5 379 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 SBSNQ6UWP8 590 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 LINC00696Q6ZRV3 163 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 PRSS58Q8IYP2 241 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 SLC34A3Q8N130 599 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 OR1N1Q8NGS0 311 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 RELTQ969Z4 430 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 ZNF354BQ96LW1 612 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 YIPF2Q9BWQ6 316 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 PITHD1Q9GZP4 211 aaPredicted RBP14.33□□□□□ -0.12
CMTM3-212ENST00000566121 ATG10Q9H0Y0 220 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 MMP25Q9NPA2 562 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 ABI3Q9P2A4 366 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 COPG2Q9UBF2 871 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 ZFP69BQ9UJL9 534 aa14.33□□□□□ -0.12
CMTM3-212ENST00000566121 A0A1B0GUH1 482 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 PABPN1LA6NDY0 278 aaKnown RBP14.32□□□□□ -0.12
CMTM3-212ENST00000566121 MAGEB17A8MXT2 336 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 CRYABP02511 175 aaKnown RBP14.32□□□□□ -0.12
CMTM3-212ENST00000566121 RNF224P0DH78 156 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 SMIM10L1P0DMW3 83 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 CDH1P12830 882 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 ZNF37AP17032 561 aaPredicted RBP14.32□□□□□ -0.12
CMTM3-212ENST00000566121 XCR1P46094 333 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 SCTRP47872 440 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 TDGF1P3P51864 188 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 PER3P56645 1201 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 ABHD17BQ5VST6 288 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 FAM180AQ6UWF9 173 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 PDSS2Q86YH6 399 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 ARMC10Q8N2F6 343 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 BBOF1Q8ND07 529 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 CATSPER1Q8NEC5 780 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 TRPV3Q8NET8 790 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 NR4A3Q92570 626 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 SMIM10Q96HG1 83 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 PDLIM2Q96JY6 352 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 OR4K3Q96R72 315 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 WDR83Q9BRX9 315 aaKnown RBP14.32□□□□□ -0.12
CMTM3-212ENST00000566121 PELI2Q9HAT8 420 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 LANCL2Q9NS86 450 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 OLAHQ9NV23 265 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 STMN3Q9NZ72 180 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 PTGFRNQ9P2B2 879 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 MAP10Q9P2G4 905 aa14.32□□□□□ -0.12
CMTM3-212ENST00000566121 SYNDIG1LA6NDD5 238 aa14.31□□□□□ -0.12
CMTM3-212ENST00000566121 OR5H15A6NDH6 313 aa14.31□□□□□ -0.12
CMTM3-212ENST00000566121 URADA6NGE7 173 aa14.31□□□□□ -0.12
CMTM3-212ENST00000566121 GALR3O60755 368 aaPredicted RBP14.31□□□□□ -0.12
CMTM3-212ENST00000566121 F7P08709 466 aaPredicted RBP14.31□□□□□ -0.12
CMTM3-212ENST00000566121 ITGAMP11215 1152 aa14.31□□□□□ -0.12
CMTM3-212ENST00000566121 ALOX12P18054 663 aa14.31□□□□□ -0.12
CMTM3-212ENST00000566121 PAFAH1B1P43034 410 aa14.31□□□□□ -0.12
CMTM3-212ENST00000566121 SNRPNP63162 240 aaKnown RBP14.31□□□□□ -0.12
CMTM3-212ENST00000566121 MAT1AQ00266 395 aaKnown RBP14.31□□□□□ -0.12
CMTM3-212ENST00000566121 RHAGQ02094 409 aa14.31□□□□□ -0.12
CMTM3-212ENST00000566121 EEF1A2Q05639 463 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms