RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 GTF2BQ00403 316 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 MORF4L2Q15014 288 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 RBBP5Q15291 538 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 GSTA3Q16772 222 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 CBWD6Q4V339 395 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 FAM133BQ5BKY9 247 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 CBWD3Q5JTY5 395 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ANKRD20A2Q5SQ80 823 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ANKRD20A1Q5TYW2 823 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ANKRD20A3Q5VUR7 823 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 KRT39Q6A163 491 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ZNF280DQ6N043 979 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 TTC27Q6P3X3 843 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 KLHL35Q6PF15 583 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 GET4Q7L5D6 327 aaPredicted RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 HAUS6Q7Z4H7 955 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 VSIG1Q86XK7 387 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 MFN1Q8IWA4 741 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ARHGAP12Q8IWW6 846 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 KATNAL2Q8IYT4 538 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 EXD1Q8NHP7 514 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 PIGOQ8TEQ8 1089 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 FAM3CQ92520 227 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ZBTB9Q96C00 473 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 DTNBP1Q96EV8 351 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 RBM41Q96IZ5 413 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 SMC6Q96SB8 1091 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 CSF3RQ99062 836 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 HAUS8Q9BT25 410 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 NUP85Q9BW27 656 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 FAM192AQ9GZU8 254 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 PIGMQ9H3S5 423 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 GOLPH3Q9H4A6 298 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 LMAN1LQ9HAT1 526 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 TRPV4Q9HBA0 871 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 UBE2TQ9NPD8 197 aaPredicted RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 NOX4Q9NPH5 578 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 ADAM22Q9P0K1 906 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 RNF7Q9UBF6 113 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 RAI2Q9Y5P3 530 aa4.08□□□□□ -1.76
LINC00561-201ENST00000565815 RANBP2P49792 3224 aaKnown RBP4.08□□□□□ -1.76
LINC00561-201ENST00000565815 BAZ2BQ9UIF8 2168 aaKnown RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 LY6G6EA0A0G2JKS1 128 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 A8MXQ7 604 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 MDM4O15151 490 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CLIC2O15247 247 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 DIAPH2O60879 1101 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 SPAG6O75602 509 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 GABRB1P18505 474 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 TAC1P20366 129 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 IVDP26440 423 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 SFNP31947 248 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CDH8P55286 799 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CSTF3Q12996 717 aaKnown RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CDC16Q13042 620 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 MESDQ14696 234 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 RALGPS2Q86X27 583 aaPredicted RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 FOXRED2Q8IWF2 684 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 MCPH1Q8NEM0 835 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 ZNF653Q96CK0 615 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 FAM120BQ96EK7 910 aaKnown RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 ABHD1Q96SE0 405 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 H2AFJQ9BTM1 129 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 TRMT61BQ9BVS5 477 aaKnown RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 SEBOXQ9HB31 216 aaPredicted RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 ZFP14Q9HCL3 533 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 RANGRFQ9HD47 186 aaPredicted RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 NINJ2Q9NZG7 142 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 HAO1Q9UJM8 370 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 TINAGQ9UJW2 476 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 EVPLQ92817 2033 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 A0A096LPK6 155 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 FAM86B1E9PN63 330 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CAPN9O14815 690 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 TEX28O15482 410 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CCDC22O60826 627 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 EDF1O60869 148 aaKnown RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CSDE1O75534 798 aaKnown RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 PROSCO94903 275 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 MT-CYBP00156 380 aaPredicted RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 KRT16P08779 473 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 FAM86B2P0C5J1 330 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CYP11B1P15538 503 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 LMO1P25800 156 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 VHLP40337 213 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 IFNAR2P48551 515 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 KCNJ2P63252 427 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 PRKG2Q13237 762 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 DYNC1I2Q13409 638 aaKnown RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CCDC142Q17RM4 750 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 PRTGQ2VWP7 1150 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 KLHL38Q2WGJ6 581 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 CEP55Q53EZ4 464 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 SOWAHCQ53LP3 525 aaPredicted RBP4.07□□□□□ -1.76
LINC00561-201ENST00000565815 KLHL24Q6TFL4 600 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 COLCA1Q6ZS62 124 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 RCOR2Q8IZ40 523 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 LRRC8CQ8TDW0 803 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 DENND1AQ8TEH3 1009 aa4.07□□□□□ -1.76
LINC00561-201ENST00000565815 KRT35Q92764 455 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms