RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 M0QZQ0 153 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SNX4O95219 450 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 APOL3O95236 402 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SOX14O95416 240 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 EPORP19235 508 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RAB25P57735 213 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TSTA3Q13630 321 aaPredicted RBP19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 LGI4Q8N135 537 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 NELL1Q92832 810 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 BARHL1Q9BZE3 327 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MBD1Q9UIS9 605 aaPredicted RBP19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PCDHB5Q9Y5E4 795 aa19.79■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ZSCAN5BA6NJL1 495 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PCDH17O14917 1159 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GGT2P36268 569 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 HTR2BP41595 481 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 DUSP4Q13115 394 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 UGT8Q16880 541 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 C11orf74Q86VG3 221 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SDR16C5Q8N3Y7 309 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TRMT61AQ96FX7 289 aaKnown RBP19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GABARAPL1Q9H0R8 117 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 IL17CQ9P0M4 197 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MKLN1Q9UL63 735 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TSC22D2O75157 780 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MTX2O75431 263 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CTXN3Q4LDR2 81 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 NOXRED1Q6NXP6 359 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PAQR6Q6TCH4 344 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 EIF3MQ7L2H7 374 aaKnown RBP19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CCDC190Q86UF4 302 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ZBTB2Q8N680 514 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SUSD3Q96L08 255 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 COL21A1Q96P44 957 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MCCC1Q96RQ3 725 aaPredicted RBP19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 COQ3Q9NZJ6 369 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PCDH10Q9P2E7 1040 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 OARD1Q9Y530 152 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CFAP20Q9Y6A4 193 aaKnown RBP19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MAU2Q9Y6X3 613 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PLXNB2O15031 1838 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PTPRDP23468 1912 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 MYO10Q9HD67 2058 aa19.78■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ERVH48-1M5A8F1 160 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 AOC2O75106 756 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 KCNJ10P78508 379 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CACNG1Q06432 222 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 FAHD1Q6P587 224 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ZNF852Q6ZMS4 543 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CBLL1Q75N03 491 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SLC34A3Q8N130 599 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 LMNTD1Q8N9Z9 388 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 OR4K1Q8NGD4 311 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 C7orf34Q96L11 122 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PTPN18Q99952 460 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TCF25Q9BQ70 676 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 SMURF1Q9HCE7 757 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ACSL6Q9UKU0 697 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 ERVW-1Q9UQF0 538 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PRAMEF4O60810 478 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 CLEC2LP0C7M8 214 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 EBLN1P0CF75 366 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 DGKAP23743 735 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 GPR50Q13585 617 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 BOP1Q14137 746 aaKnown RBP19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 PRAMEF9Q5VWM5 478 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 FAM131AQ6UXB0 335 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TMPRSS11AQ6ZMR5 421 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 RFLNAQ6ZTI6 216 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 OR5AK3PQ8NH89 298 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 FOXJ1Q92949 421 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TOR4AQ9NXH8 423 aa19.77■□□□□ 0.76
MAP1LC3B-206ENST00000564844 TRAV19A0A0A6YYK7 116 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 AKR7A2O43488 359 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SLITRK5O94991 958 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 HLA-EP13747 358 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TUFMP49411 452 aaKnown RBP19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CLCN4P51793 760 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ITGA1P56199 1179 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CAV3P56539 151 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GRB14Q14449 540 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SSX1Q16384 188 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 DUOXA1Q1HG43 343 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 TSEN54Q7Z6J9 526 aaKnown RBP19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 BBS7Q8IWZ6 715 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 DNAJC27Q9NZQ0 273 aa19.77■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SCO2O43819 266 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 MAGEA11P43364 429 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CPT1AP50416 773 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 CHRNA6Q15825 494 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 SMU1Q2TAY7 513 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 C9orf131Q5VYM1 1079 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 GPR65Q8IYL9 337 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 OR52E4Q8NGH9 312 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 FCGR1BQ92637 280 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 WBP2Q969T9 261 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 FNIP2Q9P278 1114 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ANKRD36A6QL64 1941 aa19.76■□□□□ 0.75
MAP1LC3B-206ENST00000564844 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms