RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 VPS9D1Q9Y2B5 631 aa11.94□□□□□ -0.5
SCAMP2-204ENST00000563829 TSC2P49815 1807 aa11.94□□□□□ -0.5
SCAMP2-204ENST00000563829 RFXANKO14593 260 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 WNT9AO14904 365 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 TGFB3P10600 412 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 TNFRSF1BP20333 461 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 GDF5P43026 501 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 ITGA1P56199 1179 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 RPA4Q13156 261 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 MLIPQ5VWP3 458 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 TMEM81Q6P7N7 255 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 C19orf48Q6RUI8 117 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 LIPIQ6XZB0 460 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 CFAP77Q6ZQR2 320 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 Q8N402 240 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 NPLOC4Q8TAT6 608 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 NIPSNAP1Q9BPW8 284 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 PPA2Q9H2U2 334 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 SP110Q9HB58 689 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 SERHLQ9NQF3 203 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 ZNF222Q9UK12 451 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 PCDH17O14917 1159 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 RPP40O75818 363 aaKnown RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 HOXB6P17509 224 aaKnown RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 POU1F1P28069 291 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 SSTR2P30874 369 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 HSPA7P48741 367 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 INPP1P49441 399 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 RENBPP51606 427 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 MAP2K6P52564 334 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 DSTNP60981 165 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 SRP54P61011 504 aaKnown RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 CACNB2Q08289 660 aaPredicted RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 DDI2Q5TDH0 399 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 FKBP1CQ5VVH2 108 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 LIPKQ5VXJ0 399 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 MZT2BQ6NZ67 158 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 DENND1CQ8IV53 801 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 NKAPQ8N5F7 415 aaKnown RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 SPPL2AQ8TCT8 520 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 SIPA1Q96FS4 1042 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 RBFOX1Q9NWB1 397 aaKnown RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 COMMD3Q9UBI1 195 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 SLC35F4A4IF30 521 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 IQCF5A8MTL0 148 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 TNFRSF11BO00300 401 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 PIRO00625 290 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 ORC5O43913 435 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 TRIM3O75382 744 aaPredicted RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 MMP2P08253 660 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 HOXD4P09016 255 aaPredicted RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 PRKAR1AP10644 381 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 IL2P60568 153 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 SOX4Q06945 474 aaPredicted RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 ANGPT1Q15389 498 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 MSANTD2Q6P1R3 559 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 FAM124AQ86V42 546 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 PLPP6Q8IY26 295 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 CPA6Q8N4T0 437 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 ZNF366Q8N895 744 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 OR9Q1Q8NGQ5 310 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 CREB3L4Q8TEY5 395 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 BTN2A2Q8WVV5 523 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 ST8SIA2Q92186 375 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 GTPBP3Q969Y2 492 aaKnown RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 TAPBPLQ9BX59 468 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 KCNH6Q9H252 994 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 LRTM1Q9HBL6 345 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 UBQLN1Q9UMX0 589 aaKnown RBP11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 TLR6Q9Y2C9 796 aa11.93□□□□□ -0.5
SCAMP2-204ENST00000563829 ZNF236Q9UL36 1845 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 MYBPHLA2RUH7 354 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 LYRM1O43325 122 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 KLK8O60259 260 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 IFNA16P05015 189 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 ATXN1LP0C7T5 689 aaKnown RBP11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 BCKDHAP12694 445 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 CRYBB2P43320 205 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 ETV1P50549 477 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 CAV3P56539 151 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 SNAPC1Q16533 368 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 VMACQ2NL98 169 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 CLVS2Q5SYC1 327 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 RGL4Q8IZJ4 473 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 OR10G2Q8NGC3 310 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 C9orf43Q8TAL5 461 aaPredicted RBP11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 CDKN2AIPNLQ96HQ2 116 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 IL4I1Q96RQ9 567 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 ADAMTS5Q9UNA0 930 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 SSR3Q9UNL2 185 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 ING4Q9UNL4 249 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 CCL27Q9Y4X3 112 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 IQCMA0A1B0GVH7 501 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 A0A1W2PRG6 482 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 ZNF670-ZNF695F2Z2N8 137 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 INMT-MINDY4F8WBC2 141 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 ALDH1A1P00352 501 aa11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 HAPLN1P10915 354 aaPredicted RBP11.92□□□□□ -0.5
SCAMP2-204ENST00000563829 LILRA4P59901 499 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms