RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 CLCA4Q14CN2 919 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 OR2T5Q6IEZ7 315 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 MTSS1LQ765P7 747 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 AMER2Q8N7J2 671 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 OR2T29Q8NH02 315 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 OVCA2Q8WZ82 227 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PYURFQ96I23 114 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 OR51B5Q9H339 312 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 TPT1P8Q9HAU6 139 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 CORO2BQ9UQ03 480 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 PRSS21Q9Y6M0 314 aa10.12□□□□□ -0.79
RNF40-204ENST00000563683 NPIPB15A6NHN6 443 aaPredicted RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 EFCAB9A8MZ26 197 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 FGF18O76093 207 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 MED26O95402 600 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 SLC35G4P0C7Q5 338 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 GGT1P19440 569 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 HNMTP50135 292 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 AP1S2P56377 157 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 NCS1P62166 190 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 ABHD18Q0P651 414 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 C1DQ13901 141 aaKnown RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 SLBPQ14493 270 aaKnown RBP eCLIP10.11□□□□□ -0.79
RNF40-204ENST00000563683 TEAD2Q15562 447 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 TYSND1Q2T9J0 566 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 CYP27C1Q4G0S4 372 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 SPANXN2Q5MJ10 180 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 CTSL3PQ5NE16 218 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 NOXRED1Q6NXP6 359 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 LIMS2Q7Z4I7 341 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 TMEM25Q86YD3 366 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 TRIM48Q8IWZ4 208 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 ZNF419Q96HQ0 510 aaPredicted RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 MAGEB10Q96LZ2 347 aaPredicted RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 SLIRPQ9GZT3 109 aaKnown RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 HSPE1-MOB4S4R3N1 261 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 SLC16A6O15403 523 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 TPST2O60704 377 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 SOCS5O75159 536 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 LEFTY1O75610 366 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 MFN2O95140 757 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 RPN2P04844 631 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 CHRNB1P11230 501 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 ITGA2P17301 1181 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 PIGAP37287 484 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 CTSOP43234 321 aaPredicted RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 CXCR4P61073 352 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 YBX1P67809 324 aaKnown RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 HSPB3Q12988 150 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 FADDQ13158 208 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 GANABQ14697 944 aaKnown RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 TJAP1Q5JTD0 557 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 PNCKQ6P2M8 343 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 TNFAIP8L2Q6P589 184 aaPredicted RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 PTCHD4Q6ZW05 846 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 CHST14Q8NCH0 376 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 GPR26Q8NDV2 337 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 SMG7Q92540 1137 aaKnown RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 KLK6Q92876 244 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 DPH2Q9BQC3 489 aaPredicted RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 CTPS2Q9NRF8 586 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 DPP7Q9UHL4 492 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 OSGIN1Q9UJX0 560 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 MAPRE3Q9UPY8 281 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 TMA7Q9Y2S6 64 aaKnown RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 PMF1-BGLAPU3KQ54 211 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 TRBV23OR9-2A0A075B6M9 112 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 AGAP5A6NIR3 686 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 CLDN24A6NM45 220 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 WNT9AO14904 365 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 HLA-EP13747 358 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 CSF2RAP15509 400 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 NUDT6P53370 316 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 COL9A2Q14055 689 aaPredicted RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 SF1Q15637 639 aaKnown RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 STEAP3Q658P3 488 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 CRTC1Q6UUV9 634 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 LRRC70Q7Z2Q7 622 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 DPP10Q8N608 796 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 MYDGFQ969H8 173 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 FERD3LQ96RJ6 166 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 SLC29A3Q9BZD2 475 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 BRINP2Q9C0B6 783 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 RHBGQ9H310 441 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 GORASP2Q9H8Y8 452 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 ZDHHC4Q9NPG8 344 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 MARCH5Q9NX47 278 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 ERVK-18Q9QC07 812 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 GPSM3Q9Y4H4 160 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 BACE2Q9Y5Z0 518 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 A3GALT2U3KPV4 340 aa10.11□□□□□ -0.79
RNF40-204ENST00000563683 ZFC3H1O60293 1989 aaKnown RBP10.11□□□□□ -0.79
RNF40-204ENST00000563683 IGLV3-10A0A075B6K4 115 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 A0A1B0GTL3 188 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 CENPXA8MT69 81 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 TSPAN6O43657 245 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 SLC28A2O43868 658 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 PRAMEF12O95522 483 aa10.1□□□□□ -0.79
RNF40-204ENST00000563683 BUD31P41223 144 aaPredicted RBP10.1□□□□□ -0.79
RNF40-204ENST00000563683 SSR2P43308 183 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms