RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SLBPQ14493 270 aaKnown RBP eCLIP4.59□□□□□ -1.67
SMG1-207ENST00000563235 FASTKD3Q14CZ7 662 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 USF2Q15853 346 aaPredicted RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 TPD52L1Q16890 204 aaPredicted RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 DPCR1Q3MIW9 517 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 COQ5Q5HYK3 327 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 KRT79Q5XKE5 535 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 FOXR1Q6PIV2 292 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 METTL7BQ6UX53 244 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 CXXC5Q7LFL8 322 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 CILP2Q8IUL8 1156 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 XRN1Q8IZH2 1706 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 GUF1Q8N442 669 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 FAM47BQ8NA70 645 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 OR13C3Q8NGS6 347 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 WBP2Q969T9 261 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 SNRNP40Q96DI7 357 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 OMA1Q96E52 524 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 RMND5BQ96G75 393 aaPredicted RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 B3GALT6Q96L58 329 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 TRIM15Q9C019 465 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 SLC25A32Q9H2D1 315 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 EPHX3Q9H6B9 360 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 LRRC4Q9HBW1 653 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 LIN7CQ9NUP9 197 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 MED17Q9NVC6 651 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 ACSL6Q9UKU0 697 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 TMCO1Q9UM00 188 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 FAM32AQ9Y421 112 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 SF3B1O75533 1304 aaKnown RBP eCLIP4.59□□□□□ -1.672e-6■■■■■ 127
SMG1-207ENST00000563235 EP400Q96L91 3159 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 NOS1P29475 1434 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 DAPK1P53355 1430 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 SSH2Q76I76 1423 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 OR2W5A6NFC9 320 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 TMEM238C9JI98 176 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 CLDN4O14493 209 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 TERTO14746 1132 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 BIRC5O15392 142 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 STX11O75558 287 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 UPK3AO75631 287 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 LYPLA2O95372 231 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 C8AP07357 584 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 GSTM1P09488 218 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 CYP2C8P10632 490 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 ITGAMP11215 1152 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 UQCRC2P22695 453 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 GLDCP23378 1020 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 FPR2P25090 351 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 HMOX2P30519 316 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 TIA1P31483 386 aaKnown RBP eCLIP4.59□□□□□ -1.67
SMG1-207ENST00000563235 PTGER4P35408 488 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 RAP1GDS1P52306 607 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 PEX3P56589 373 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 SEC61GP60059 68 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 CXCR4P61073 352 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 PPIAP62937 165 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 PPP2R2BQ00005 443 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 ECT2LQ008S8 904 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 KRT76Q01546 638 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 HSF2Q03933 536 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 STX3Q13277 289 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 FHL3Q13643 280 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 CCNYL2Q5T2Q4 361 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 NT5DC1Q5TFE4 455 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 ZNF787Q6DD87 383 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 GADL1Q6ZQY3 521 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 SLC13A5Q86YT5 568 aaPredicted RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 CDK20Q8IZL9 346 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 LRRC75A-AS1Q8N1F1 130 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 THEM5Q8N1Q8 247 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 FAM89BQ8N5H3 189 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 BCORP1Q8N888 145 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 PDPRQ8NCN5 879 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 NLGN2Q8NFZ4 835 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 OR52N1Q8NH53 320 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 TBC1D16Q8TBP0 767 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 ACTL9Q8TC94 416 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 ARNTL2Q8WYA1 636 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 DAZLQ92904 295 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 SPSB1Q96BD6 273 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 NSMCE3Q96MG7 304 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 RANBP9Q96S59 729 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 CHRDL1Q9BU40 450 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 TOLLIPQ9H0E2 274 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 RACGAP1Q9H0H5 632 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 KCNN2Q9H2S1 579 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 CRISPLD1Q9H336 500 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 METTL8Q9H825 291 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 CSNK1G1Q9HCP0 422 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 PLCXD1Q9NUJ7 323 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 PARVAQ9NVD7 372 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 SEC14L3Q9UDX4 400 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 NOCTQ9UK39 431 aaKnown RBP4.59□□□□□ -1.67
SMG1-207ENST00000563235 RASD1Q9Y272 281 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 NRXN1Q9ULB1 1477 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 TRPM2O94759 1503 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 NRAPQ86VF7 1730 aa4.59□□□□□ -1.67
SMG1-207ENST00000563235 PPIP5K1Q6PFW1 1433 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms