RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 IARS2Q9NSE4 1012 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 C19orf25Q9UFG5 118 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CCL21O00585 134 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MAN1A2O60476 641 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 RDH16O75452 317 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 TUBA3CQ13748 450 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CYP1B1Q16678 543 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PHKG1Q16816 387 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ZXDCQ2QGD7 858 aaPredicted RBP15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 TUBA3EQ6PEY2 450 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CCDC137Q6PK04 289 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 AGTRAPQ6RW13 159 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PCGF5Q86SE9 256 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MRGPRGQ86SM5 289 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ASPGQ86U10 573 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SLC26A11Q86WA9 606 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CRLF3Q8IUI8 442 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MCEMP1Q8IX19 187 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CAMKVQ8NCB2 501 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MDS2Q8NDY4 140 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 FAM167BQ9BTA0 163 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SGPP1Q9BX95 441 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 RBCK1Q9BYM8 510 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PCBD2Q9H0N5 130 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ANKHQ9HCJ1 492 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ANKRD10Q9NXR5 420 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 TRMT6Q9UJA5 497 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SH3BGRL2Q9UJC5 107 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 NAALAD2Q9Y3Q0 740 aa15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 KLF2Q9Y5W3 355 aaPredicted RBP15.74■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SCN2AQ99250 2005 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ZNF860A6NHJ4 632 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CDC123O75794 336 aaPredicted RBP15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 C8GP07360 202 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MYBL2P10244 700 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CDH1P12830 882 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 GABRB3P28472 473 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 AGTR2P50052 363 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CCZ1BP86790 482 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CCZ1P86791 482 aaPredicted RBP15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 RHAGQ02094 409 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SP140Q13342 867 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 NAE1Q13564 534 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CAPN13Q6MZZ7 669 aaPredicted RBP15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 LRRC8EQ6NSJ5 796 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PAQR3Q6TCH7 311 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 C17orf64Q86WR6 236 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 LRRC8AQ8IWT6 810 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 C2CD4AQ8NCU7 369 aaPredicted RBP15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 OR5T3Q8NGG3 340 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SLC13A3Q8WWT9 602 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ALKBH8Q96BT7 664 aaKnown RBP15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ZNF354BQ96LW1 612 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 HES7Q9BYE0 225 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 KCNK13Q9HB14 408 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PARVBQ9HBI1 364 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 LANCL2Q9NS86 450 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SUCOQ9UBS9 1254 aaKnown RBP15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PCDHGB6Q9Y5F9 930 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SCN3AQ9NY46 2000 aa15.73■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SLC19A2O60779 497 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 NPPBP16860 134 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CD96P40200 585 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CDKN2DP55273 166 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MEF2AQ02078 507 aaPredicted RBP15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 DHX9Q08211 1270 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 NAA30Q147X3 362 aaPredicted RBP15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CRYMQ14894 314 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ABRAXAS2Q15018 415 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 EXT1Q16394 746 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SFT2D3Q587I9 215 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 RBM20Q5T481 1227 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 UGT3A1Q6NUS8 523 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PAPD4Q6PIY7 484 aaKnown RBP15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 LCTLQ6UWM7 567 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 BNC2Q6ZN30 1099 aaPredicted RBP15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 ZNF808Q8N4W9 903 aaPredicted RBP15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MFSD9Q8NBP5 474 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 M1APQ8TC57 530 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 TSLPQ969D9 159 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MOCOSQ96EN8 888 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PEX11GQ96HA9 241 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MMP25Q9NPA2 562 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 KLHL1Q9NR64 748 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PPP2R2CQ9Y2T4 447 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SLC22A7Q9Y694 548 aa15.72■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SLC16A5O15375 505 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 DNAJB6O75190 326 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 TSPAN12O95859 305 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 SLC35G6P0C7Q6 338 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 PGAM1P18669 254 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 CCND1P24385 295 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 RGS4P49798 205 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 RBPJQ06330 500 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 OR1C1Q15619 314 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 NSDHLQ15738 373 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 MEP1AQ16819 746 aa15.71■□□□□ 0.11
VPS9D1-AS1-201ENST00000562298 RNASEH2BQ5TBB1 312 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms