RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 AOC2O75106 756 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 POU2F1P14859 743 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 OR1E2P47887 323 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 IRF8Q02556 426 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 MLIPQ5VWP3 458 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 TTC23LQ6PF05 361 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 LINC01599Q8WXQ3 324 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 COPS8Q99627 209 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 TSEN34Q9BSV6 310 aaKnown RBP13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 TTLL2Q9BWV7 592 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 MS4A12Q9NXJ0 267 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 ZNF226Q9NYT6 803 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 WBP11Q9Y2W2 641 aaKnown RBP13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 A0A1W2PQ67 120 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 PLK4O00444 970 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 CTDSP2O14595 271 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 SMAD6O43541 496 aaKnown RBP13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 PRAMEF4O60810 478 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 PCSK2P16519 638 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 CRYBA2P53672 197 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 ACSM2AQ08AH3 577 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 CDH18Q13634 790 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 PRAMEF9Q5VWM5 478 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 ACSM2BQ68CK6 577 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 FUT10Q6P4F1 479 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 LGI4Q8N135 537 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 C2orf69Q8N8R5 385 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 GPR26Q8NDV2 337 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 OR8J2Q8NGG1 315 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 PIK3R3Q92569 461 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 ASIC4Q96FT7 647 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 NIPSNAP1Q9BPW8 284 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 CCM2Q9BSQ5 444 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 SLC12A9Q9BXP2 914 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 RNF38Q9H0F5 515 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 ZNF556Q9HAH1 456 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 FKBP14Q9NWM8 211 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 FBXL12Q9NXK8 326 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 NDUFAF4Q9P032 175 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 HCSTQ9UBK5 93 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 VPS29Q9UBQ0 182 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 BTBD3Q9Y2F9 522 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 POFUT2Q9Y2G5 429 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 PADI2Q9Y2J8 665 aa13.48□□□□□ -0.25
VPS9D1-202ENST00000561976 E9PQ18 207 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 RGS5O15539 181 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 PRMT3O60678 531 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 DPM1O60762 260 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 ANXA8P13928 327 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 CRATP43155 626 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 SLC15A1P46059 708 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 DMPKQ09013 629 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 RGNQ15493 299 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 TSTQ16762 297 aaKnown RBP13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 CDKL4Q5MAI5 379 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 ZNF544Q6NX49 715 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 TPGS1Q6ZTW0 290 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 GATAD2AQ86YP4 633 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 NAGSQ8N159 534 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 VPS37AQ8NEZ2 397 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 B3GNT7Q8NFL0 401 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 CRELD1Q96HD1 420 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 PCDHGA2Q9Y5H1 932 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 CA12O43570 354 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 C8GP07360 202 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 HNMTP50135 292 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 MRPS15P82914 257 aaKnown RBP13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 TAF12Q16514 161 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 EXOC3L2Q2M3D2 409 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 CPTPQ5TA50 214 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 CPA6Q8N4T0 437 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 C11orf65Q8NCR3 313 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 DENND6BQ8NEG7 585 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 C17orf50Q8WW18 174 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 SLC30A2Q9BRI3 323 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 EXOSC4Q9NPD3 245 aaKnown RBP13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 ZDHHC3Q9NYG2 299 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 TRPM5Q9NZQ8 1165 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 RUVBL1Q9Y265 456 aaKnown RBP13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 CFL2Q9Y281 166 aa13.47□□□□□ -0.25
VPS9D1-202ENST00000561976 H7C4K7 107 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 BNIP3LO60238 219 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 CYP7B1O75881 506 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 OR56A5P0C7T3 313 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 CYBAP13498 195 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 JUPP14923 745 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 SLC6A12P48065 614 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 GATMP50440 423 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 SELENOWP63302 87 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 BCL7AQ4VC05 210 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 XKR6Q5GH73 641 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 TAS1R1Q7RTX1 841 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 GPR155Q7Z3F1 870 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 OR5M11Q96RB7 305 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 RAD9AQ99638 391 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 MGLLQ99685 303 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 P2RY13Q9BPV8 354 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 SH3BP4Q9P0V3 963 aa13.46□□□□□ -0.25
VPS9D1-202ENST00000561976 FAM8A1Q9UBU6 413 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms