RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	KIRREL3	Q8IZU9	778 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	CHCHD4	Q8N4Q1	142 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	TMCO5A	Q8N6Q1	288 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	CCDC63	Q8NA47	563 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	OR2T11	Q8NH01	316 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	PGLYRP2	Q96PD5	576 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	UTP14A	Q9BVJ6	771 aa	Known RBP	4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	CDK19	Q9BWU1	502 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	ACTL8	Q9H568	366 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	C2CD2	Q9Y426	696 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	TMEM2	Q9UHN6	1383 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	CDC42BPA	Q5VT25	1732 aa		4.85	□□□□□ -1.63
TCF12-223	ENST00000561235	WDR81	Q562E7	1941 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	TNS1	Q9HBL0	1735 aa	Known RBP	4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	DHX29	Q7Z478	1369 aa	Known RBP	4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	OOEP	A6NGQ2	149 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	C17orf105	B2RV13	164 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	NME6	O75414	186 aa	Predicted RBP	4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	CLPTM1	O96005	669 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	FAM157C	P0CG43	387 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	PRSS56	P0CW18	603 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	F3	P13726	295 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	ALDH4A1	P30038	563 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	DUT	P33316	252 aa	Known RBP	4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	HERV-K104	P61576	105 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	SULT2A1	Q06520	285 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	EXT1	Q16394	746 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	ZNF674	Q2M3X9	581 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	FAM46C	Q5VWP2	391 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	TMEM207	Q6UWW9	146 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	LINC00696	Q6ZRV3	163 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	CROCCP3	Q8IVE0	287 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	NUP93	Q8N1F7	819 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	LRTM2	Q8N967	370 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	CTCFL	Q8NI51	663 aa	Predicted RBP	4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	GRK7	Q8WTQ7	553 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	SGF29	Q96ES7	293 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	C4orf45	Q96LM5	186 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	KLHL5	Q96PQ7	755 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	CHMP4B	Q9H444	224 aa	Known RBP	4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	TMEM206	Q9H813	350 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	TUFT1	Q9NNX1	390 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	GMEB2	Q9UKD1	530 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	PPP2R2C	Q9Y2T4	447 aa		4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	HBS1L	Q9Y450	684 aa	Known RBP	4.84	□□□□□ -1.63
TCF12-223	ENST00000561235	NRK	Q7Z2Y5	1582 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	CLIP1	P30622	1438 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	TRBV5-5	A0A0J9YX44	114 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	SNURFL	B1AK76	121 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	BLOC1S5-TXNDC5	H3BN57	136 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	CTDSPL	O15194	276 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	C9	P02748	559 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	GP1BB	P13224	206 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	CCND3	P30281	292 aa	Predicted RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	SSTR1	P30872	391 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	MAGEA11	P43364	429 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	TNNT2	P45379	298 aa	Predicted RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	SP3	Q02447	781 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	RBM39	Q14498	530 aa	Known RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	XKR6	Q5GH73	641 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	FFAR4	Q5NUL3	377 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	SPOUT1	Q5T280	376 aa	Known RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	LCN1P1	Q5VSP4	162 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	PODNL1	Q6PEZ8	512 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	NHLRC1	Q6VVB1	395 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	USP43	Q70EL4	1123 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	CCDC91	Q7Z6B0	441 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	MTERF4	Q7Z6M4	381 aa	Known RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	CUZD1	Q86UP6	607 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	SNX32	Q86XE0	403 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	APLF	Q8IW19	511 aa	Predicted RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	C4orf19	Q8IY42	314 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	CNBD1	Q8NA66	436 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	TRIM58	Q8NG06	486 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	NCOA7	Q8NI08	942 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	ZNF501	Q96CX3	271 aa	Predicted RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	GIMAP5	Q96F15	307 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	PRAC1	Q96KF2	57 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	AK8	Q96MA6	479 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	HNRNPAB	Q99729	332 aa	Known RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	FUT8	Q9BYC5	575 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	DNAI2	Q9GZS0	605 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	LSG1	Q9H089	658 aa	Known RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	THAP2	Q9H0W7	228 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	SDCBP2	Q9H190	292 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	ATP13A3	Q9H7F0	1226 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	RUVBL2	Q9Y230	463 aa	Known RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	KLK4	Q9Y5K2	254 aa		4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	MARF1	Q9Y4F3	1742 aa	Known RBP	4.83	□□□□□ -1.64
TCF12-223	ENST00000561235	MYOM2	P54296	1465 aa		4.82	□□□□□ -1.64
TCF12-223	ENST00000561235	CFAP65	Q6ZU64	1925 aa	Known RBP	4.82	□□□□□ -1.64
TCF12-223	ENST00000561235		A0A087WYN8	130 aa		4.82	□□□□□ -1.64
TCF12-223	ENST00000561235		O00370	1275 aa		4.82	□□□□□ -1.64
TCF12-223	ENST00000561235	EPHB6	O15197	1021 aa		4.82	□□□□□ -1.64
TCF12-223	ENST00000561235	PCDH7	O60245	1069 aa		4.82	□□□□□ -1.64
TCF12-223	ENST00000561235	FMO6P	O60774	539 aa		4.82	□□□□□ -1.64
TCF12-223	ENST00000561235	GLRA3	O75311	464 aa		4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms