RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 KATNBL1Q9H079 304 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 ABHD16BQ9H3Z7 469 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 E9PQ18 207 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 SUV39H1O43463 412 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 TMCC2O75069 709 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 TSC22D2O75157 780 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 SCO1O75880 301 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 EPB42P16452 691 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 KIR2DL3P43628 341 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 KCNQ1P51787 676 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 KCNJ10P78508 379 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 RUNX1T1Q06455 604 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 MLIPQ5VWP3 458 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 VWA5B2Q8N398 1253 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 APIPQ96GX9 242 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 CINPQ9BW66 212 aaPredicted RBP15.93■□□□□ 0.14
TPM1-228ENST00000560975 NARFLQ9H6Q4 476 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 RNF121Q9H920 327 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 ABCB9Q9NP78 766 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 COQ3Q9NZJ6 369 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 PSPHP78330 225 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 VEPH1Q14D04 833 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 DUSP28Q4G0W2 176 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 OR4M1Q8NGD0 313 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 PKMYT1Q99640 499 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 AFF4Q9UHB7 1163 aaKnown RBP15.93■□□□□ 0.14
TPM1-228ENST00000560975 TMPRSS11EQ9UL52 423 aa15.93■□□□□ 0.14
TPM1-228ENST00000560975 NOS1APO75052 506 aaPredicted RBP15.92■□□□□ 0.14
TPM1-228ENST00000560975 GABRB1P18505 474 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 POU1F1P28069 291 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 PTGER3P43115 390 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 RORCP51449 518 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 CRYBA2P53672 197 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 SPIBQ01892 262 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 PDZK1Q5T2W1 519 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 AMIGO1Q86WK6 493 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 KRT73Q86Y46 540 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 LGI4Q8N135 537 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 CARNMT1Q8N4J0 409 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 ENKURQ8TC29 256 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 ATP13A2Q9NQ11 1180 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 TLR8Q9NR97 1041 aaKnown RBP15.92■□□□□ 0.14
TPM1-228ENST00000560975 FAM105AQ9NUU6 356 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 CMAHPQ9Y471 501 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 MBLAC1A4D2B0 266 aaPredicted RBP15.92■□□□□ 0.14
TPM1-228ENST00000560975 MAGEB17A8MXT2 336 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 CSF3P09919 207 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 ERP29P30040 261 aaKnown RBP15.92■□□□□ 0.14
TPM1-228ENST00000560975 PKLRP30613 574 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 NKX3-2P78367 333 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 DSC3Q14574 896 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 QPRTQ15274 297 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 DUOXA1Q1HG43 343 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 EXOC3L2Q2M3D2 409 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 C5orf22Q49AR2 442 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 PRAMEF19Q5SWL8 479 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 DIRAS2Q96HU8 199 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 OPALINQ96PE5 141 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 TTLL2Q9BWV7 592 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 HHATLQ9HCP6 504 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 LATS2Q9NRM7 1088 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 CLEC2DQ9UHP7 191 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 HSPB11Q9Y547 144 aa15.92■□□□□ 0.14
TPM1-228ENST00000560975 TRAV19A0A0A6YYK7 116 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 CYP17A1P05093 508 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 EBLN1P0CF75 366 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 CYP2A6P11509 494 aaPredicted RBP15.91■□□□□ 0.14
TPM1-228ENST00000560975 WEE1P30291 646 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 CLCN4P51793 760 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 CRYBB1P53674 252 aaPredicted RBP15.91■□□□□ 0.14
TPM1-228ENST00000560975 EIF4HQ15056 248 aaKnown RBP15.91■□□□□ 0.14
TPM1-228ENST00000560975 SF1Q15637 639 aaKnown RBP15.91■□□□□ 0.14
TPM1-228ENST00000560975 PYDC2Q56P42 97 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 TSEN54Q7Z6J9 526 aaKnown RBP15.91■□□□□ 0.14
TPM1-228ENST00000560975 NLGN4YQ8NFZ3 816 aaPredicted RBP15.91■□□□□ 0.14
TPM1-228ENST00000560975 USP7Q93009 1102 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 FAM83DQ9H4H8 585 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 ELOVL6Q9H5J4 265 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 ASIC5Q9NY37 505 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 KCNN3Q9UGI6 736 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 IGLV3-10A0A075B6K4 115 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 FABP12A6NFH5 140 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 POLR1CO15160 346 aaPredicted RBP15.91■□□□□ 0.14
TPM1-228ENST00000560975 INSIG1O15503 277 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 CLDN9O95484 217 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 ACPPP15309 386 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 MLLT3P42568 568 aaPredicted RBP15.91■□□□□ 0.14
TPM1-228ENST00000560975 DALRD3Q5D0E6 543 aaKnown RBP15.91■□□□□ 0.14
TPM1-228ENST00000560975 ABI3BPQ7Z7G0 1075 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 RDH10Q8IZV5 341 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 IL4I1Q96RQ9 567 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 PRM3Q9NNZ6 103 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 TRPS1Q9UHF7 1281 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 OARD1Q9Y530 152 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 RAI2Q9Y5P3 530 aa15.91■□□□□ 0.14
TPM1-228ENST00000560975 OR2B3O76000 313 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 SLC25A14O95258 325 aaPredicted RBP15.9■□□□□ 0.14
TPM1-228ENST00000560975 TSPAN19P0C672 248 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 CLEC2LP0C7M8 214 aa15.9■□□□□ 0.14
TPM1-228ENST00000560975 GRK4P32298 578 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms