RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SLC3A1Q07837 685 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 SERINC3Q13530 473 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 RHEBQ15382 184 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 VMACQ2NL98 169 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLC36A4Q6YBV0 504 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 LYSMD3Q7Z3D4 306 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 KCT2Q8NC54 265 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 FBXL8Q96CD0 374 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 PHOX2BQ99453 314 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 YIPF4Q9BSR8 244 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 CARS2Q9HA77 564 aaKnown RBP12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 POPDC3Q9HBV1 291 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 UTS2RQ9UKP6 389 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 CMAHPQ9Y471 501 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 HSPB11Q9Y547 144 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 MAP2P11137 1827 aaKnown RBP12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 A0A0G2JN53 185 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 TEX13DA0A0J9YY54 714 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 A0A1W2PQ45 241 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 A0A1W2PQY0 241 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 C7P10643 843 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 MAT2AP31153 395 aaKnown RBP12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 CD47Q08722 323 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 PDGFRLQ15198 375 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 SGCBQ16585 318 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 TMIGD1Q6UXZ0 262 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 TPRG1Q6ZUI0 275 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 PNPLA2Q96AD5 504 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 ARMC5Q96C12 935 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 ADAM7Q9H2U9 754 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 MRM3Q9HC36 420 aaKnown RBP12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 ENAMQ9NRM1 1142 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 PLCL2Q9UPR0 1127 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 MAB21L2Q9Y586 359 aa12.82□□□□□ -0.36
CSPG4P11-201ENST00000560634 LCN1P31025 176 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 TMBIM6P55061 237 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 E2F1Q01094 437 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 GHRHRQ02643 423 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 CHAF1BQ13112 559 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 TRAM2Q15035 370 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLC29A4Q7RTT9 530 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZNF598Q86UK7 904 aaKnown RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZNF565Q8N9K5 539 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 OR5AK3PQ8NH89 298 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 GRHL3Q8TE85 626 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SH3RF2Q8TEC5 729 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SMPDL3BQ92485 455 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 TRIM43Q96BQ3 446 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 TMED9Q9BVK6 235 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 HSD3B7Q9H2F3 369 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 CD93Q9NPY3 652 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 B3GAT2Q9NPZ5 323 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 PLEKHA6Q9Y2H5 1048 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 GOLGA4Q13439 2230 aaKnown RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 H7C2Y5 167 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 CDC7O00311 574 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 HTR1AP08908 422 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 VIPR1P32241 457 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 UGT2B10P36537 528 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 ARSFP54793 590 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 GPX6P59796 221 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 GALNT2Q10471 571 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 KCNC3Q14003 757 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 REEP3Q6NUK4 255 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 GOLGA7Q7Z5G4 137 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 CMTR2Q8IYT2 770 aaKnown RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 NFKBIDQ8NI38 313 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 NEDD4LQ96PU5 975 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 WACQ9BTA9 647 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 RNF121Q9H920 327 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 ALKBH4Q9NXW9 302 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 NKX1-2Q9UD57 310 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 IGKV6D-41A0A0C4DH26 115 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 NOTOA8MTQ0 251 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 INMT-MINDY4F8WBC2 141 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 M0R036 132 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 FLRT2O43155 660 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 DFNA5O60443 496 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 RPP14O95059 124 aaKnown RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 G6PDP11413 515 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 ELNP15502 786 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 CASRP41180 1078 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 STC1P52823 247 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SNTA1Q13424 505 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 DECR1Q16698 335 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 MBLAC2Q68D91 279 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 ANKRD26P1Q6NSI1 321 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 CHERPQ8IWX8 916 aaKnown RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 PHTF2Q8N3S3 785 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 FAM86B1Q8N7N1 296 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLC7A6OSQ96CW6 309 aaPredicted RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLC45A3Q96JT2 553 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 FANCFQ9NPI8 374 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 TMEM184CQ9NVA4 438 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 LRRN3E7EW58 273 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 PROM1O43490 865 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLC19A2O60779 497 aa12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 POP7O75817 140 aaKnown RBP12.81□□□□□ -0.36
CSPG4P11-201ENST00000560634 AHSA1O95433 338 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms