RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 KCT2Q8NC54 265 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 ZCCHC10Q8TBK6 192 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 M1APQ8TC57 530 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 EEF1AKMT1Q8WVE0 214 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 SIGLEC10Q96LC7 697 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 FAM167BQ9BTA0 163 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 FAM129AQ9BZQ8 928 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 SH3BGRL2Q9UJC5 107 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 SH2B3Q9UQQ2 575 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 PDE10AQ9Y233 779 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 NEU2Q9Y3R4 380 aa16.41■□□□□ 0.22
CRTC3-208ENST00000560098 LCMT2O60294 686 aaKnown RBP16.4■□□□□ 0.22
CRTC3-208ENST00000560098 C8GP07360 202 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 ELAVL4P26378 380 aaKnown RBP16.4■□□□□ 0.22
CRTC3-208ENST00000560098 GRK3P35626 688 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 RGS4P49798 205 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 CASP6P55212 293 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 TUBA3CQ13748 450 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 MEP1AQ16819 746 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 CAPN13Q6MZZ7 669 aaPredicted RBP16.4■□□□□ 0.22
CRTC3-208ENST00000560098 TUBA3EQ6PEY2 450 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 BNC2Q6ZN30 1099 aaPredicted RBP16.4■□□□□ 0.22
CRTC3-208ENST00000560098 MBOAT1Q6ZNC8 495 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 SLC26A11Q86WA9 606 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 PDSS2Q86YH6 399 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 CRLF3Q8IUI8 442 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 PALM2Q8IXS6 379 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.4■□□□□ 0.22
CRTC3-208ENST00000560098 SLC13A3Q8WWT9 602 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 NDNQ99608 321 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 ATG10Q9H0Y0 220 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 PARVBQ9HBI1 364 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 MMP25Q9NPA2 562 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 IARS2Q9NSE4 1012 aaKnown RBP16.4■□□□□ 0.22
CRTC3-208ENST00000560098 NAALAD2Q9Y3Q0 740 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 SLC22A7Q9Y694 548 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 OTOGQ6ZRI0 2925 aa16.4■□□□□ 0.22
CRTC3-208ENST00000560098 FBN2P35556 2912 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 TTI1O43156 1089 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 SLC19A2O60779 497 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 RDH16O75452 317 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 WISP2O76076 250 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 SLC35G6P0C7Q6 338 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 CCND1P24385 295 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 TIAL1Q01085 375 aaKnown RBP eCLIP16.39■□□□□ 0.21
CRTC3-208ENST00000560098 SP140Q13342 867 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 NAE1Q13564 534 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 CCDC137Q6PK04 289 aaKnown RBP16.39■□□□□ 0.21
CRTC3-208ENST00000560098 LCTLQ6UWM7 567 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 RASGEF1CQ8N431 466 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 NAT8LQ8N9F0 302 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 MDS2Q8NDY4 140 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 ALKBH8Q96BT7 664 aaKnown RBP16.39■□□□□ 0.21
CRTC3-208ENST00000560098 SIGLEC12Q96PQ1 595 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 UTP23Q9BRU9 249 aaKnown RBP16.39■□□□□ 0.21
CRTC3-208ENST00000560098 SGPP1Q9BX95 441 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 CHST11Q9NPF2 352 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 ANKRD10Q9NXR5 420 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 TAS2R13Q9NYV9 303 aa16.39■□□□□ 0.21
CRTC3-208ENST00000560098 SLC16A5O15375 505 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 CDH1P12830 882 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 IL10P22301 178 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 HTR1EP28566 365 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 CD96P40200 585 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 RHAGQ02094 409 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 ACTN3Q08043 901 aaPredicted RBP16.38■□□□□ 0.21
CRTC3-208ENST00000560098 ABRAXAS2Q15018 415 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 OR1C1Q15619 314 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 NSDHLQ15738 373 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 CYP1B1Q16678 543 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 ZNF630Q2M218 657 aaPredicted RBP16.38■□□□□ 0.21
CRTC3-208ENST00000560098 SFT2D3Q587I9 215 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 PAPD4Q6PIY7 484 aaKnown RBP16.38■□□□□ 0.21
CRTC3-208ENST00000560098 MYO1HQ8N1T3 1032 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 MFSD9Q8NBP5 474 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 C2CD4AQ8NCU7 369 aaPredicted RBP16.38■□□□□ 0.21
CRTC3-208ENST00000560098 PLPP5Q8NEB5 264 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 THAP3Q8WTV1 239 aaPredicted RBP16.38■□□□□ 0.21
CRTC3-208ENST00000560098 PEX11GQ96HA9 241 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 MS4A14Q96JA4 679 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 OR1F2PQ96R84 312 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 LPAR4Q99677 370 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 NPAS2Q99743 824 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 RBCK1Q9BYM8 510 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 KLHL1Q9NR64 748 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 MYO7BQ6PIF6 2116 aa16.38■□□□□ 0.21
CRTC3-208ENST00000560098 MAGEB17A8MXT2 336 aa16.37■□□□□ 0.21
CRTC3-208ENST00000560098 CDC123O75794 336 aaPredicted RBP16.37■□□□□ 0.21
CRTC3-208ENST00000560098 MLYCDO95822 493 aa16.37■□□□□ 0.21
CRTC3-208ENST00000560098 HIST1H2AGP0C0S8 130 aaPredicted RBP16.37■□□□□ 0.21
CRTC3-208ENST00000560098 CD46P15529 392 aa16.37■□□□□ 0.21
CRTC3-208ENST00000560098 NPPBP16860 134 aa16.37■□□□□ 0.21
CRTC3-208ENST00000560098 HIST1H2ADP20671 130 aa16.37■□□□□ 0.21
CRTC3-208ENST00000560098 EEF1DP29692 281 aaKnown RBP16.37■□□□□ 0.21
CRTC3-208ENST00000560098 PTGER4P35408 488 aa16.37■□□□□ 0.21
CRTC3-208ENST00000560098 HERC3Q15034 1050 aa16.37■□□□□ 0.21
CRTC3-208ENST00000560098 PHKG1Q16816 387 aa16.37■□□□□ 0.21
CRTC3-208ENST00000560098 SPINK14Q6IE38 97 aa16.37■□□□□ 0.21
CRTC3-208ENST00000560098 XKRXQ6PP77 449 aa16.37■□□□□ 0.21
CRTC3-208ENST00000560098 PAQR3Q6TCH7 311 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms