RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 NME2P1O60361 137 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 MLYCDO95822 493 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 CATP04040 527 aaKnown RBP14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 TPOP07202 933 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 NME2P22392 152 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 HSD17B2P37059 387 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 ZNF75DP51815 510 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 BASP1P80723 227 aaKnown RBP14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 SNX1Q13596 522 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 MAPKAPK3Q16644 382 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 NDUFA9Q16795 377 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 CTSL3PQ5NE16 218 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 FAM57AQ8TBR7 257 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 C1orf54Q8WWF1 131 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 TREX1Q9NSU2 369 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 LRFN1Q9P244 771 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 GALPQ9UBC7 116 aa14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 RPH3AQ9Y2J0 694 aaPredicted RBP14.67□□□□□ -0.06
AC243562.3-201ENST00000559866 ABCA2Q9BZC7 2435 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 SLC25A12O75746 678 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 ESR1P03372 595 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 HOXD4P09016 255 aaPredicted RBP14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 ETS1P14921 441 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 EZRP15311 586 aaKnown RBP14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 IL1RNP18510 177 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 CHRM3P20309 590 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 TPP2P29144 1249 aaPredicted RBP14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 FMO4P31512 558 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 XCR1P46094 333 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 AVPR1BP47901 424 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 NPY2RP49146 381 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 ARHGAP19Q14CB8 494 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 CEBPEQ15744 281 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 SFT2D3Q587I9 215 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 EMC4Q5J8M3 183 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 ICE2Q659A1 982 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 PAPD4Q6PIY7 484 aaKnown RBP14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 C4orf22Q6V702 233 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 VN1R4Q7Z5H5 301 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 ADCK2Q7Z695 626 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 SLC13A5Q86YT5 568 aaPredicted RBP14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 OR51Q1Q8NH59 317 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 LILRB4Q8NHJ6 448 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 M1APQ8TC57 530 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 TSLPQ969D9 159 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 FAM136AQ96C01 138 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 SMR3AQ99954 134 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 CDCP1Q9H5V8 836 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 MMP25Q9NPA2 562 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 ZNF358Q9NW07 568 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 DRG1Q9Y295 367 aaKnown RBP14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 VPS9D1Q9Y2B5 631 aa14.66□□□□□ -0.06
AC243562.3-201ENST00000559866 TMEM200CA6NKL6 621 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 SGK494L7N484 410 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 NIPSNAP2O75323 286 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 MATN4O95460 622 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 NMBRP28336 390 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 PTGS2P35354 604 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 CRADDP78560 199 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 FAM53BQ14153 422 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 GBX1Q14549 363 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 TTLL9Q3SXZ7 439 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 CMPK2Q5EBM0 449 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 GSTA5Q7RTV2 222 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 PRUNE1Q86TP1 453 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 PDSS2Q86YH6 399 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 FAM98AQ8NCA5 519 aaKnown RBP14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 TCF12Q99081 682 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 OLFM1Q99784 485 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 EBNA1BP2Q99848 306 aaKnown RBP14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 ABCF3Q9NUQ8 709 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 C19orf25Q9UFG5 118 aaPredicted RBP14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 KCNN3Q9UGI6 736 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 CAPN6Q9Y6Q1 641 aa14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 FLNAP21333 2647 aaKnown RBP14.65□□□□□ -0.06
AC243562.3-201ENST00000559866 FOXO6A8MYZ6 492 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 MYO1CO00159 1063 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 CDC40O60508 579 aaKnown RBP eCLIP14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 CDC123O75794 336 aaPredicted RBP14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 FAM155BO75949 473 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 VAPBO95292 243 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 PAMP19021 973 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 OGNP20774 298 aaKnown RBP14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 CHRNB4P30926 498 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 RPL22P35268 128 aaKnown RBP14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 MEOX1P50221 254 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 PNLIPRP1P54315 467 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 SLC26A5P58743 744 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 ABATP80404 500 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 RHAGQ02094 409 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 PRDX1Q06830 199 aaKnown RBP14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 MYBPHQ13203 477 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 SNTB1Q13884 538 aaKnown RBP14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 USP10Q14694 798 aaKnown RBP14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 TYSND1Q2T9J0 566 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 Q71RC1 249 aaPredicted RBP14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 RNF10Q8N5U6 811 aaKnown RBP14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 MCOLN3Q8TDD5 553 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 LPGAT1Q92604 370 aa14.64□□□□□ -0.07
AC243562.3-201ENST00000559866 SEC16BQ96JE7 1060 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms