RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 GGT1P19440 569 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 HRH2P25021 359 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 TRIM23P36406 574 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 C21orf58P58505 322 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 RACK1P63244 317 aaKnown RBP17.11■□□□□ 0.33
SNX1-208ENST00000559844 SPIN4Q56A73 249 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 FAM83HQ6ZRV2 1179 aaPredicted RBP17.11■□□□□ 0.33
SNX1-208ENST00000559844 AMIGO2Q86SJ2 522 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 DCUN1D3Q8IWE4 304 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 LRRC56Q8IYG6 542 aaPredicted RBP17.11■□□□□ 0.33
SNX1-208ENST00000559844 TBC1D21Q8IYX1 336 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 GALNT4Q8N4A0 578 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 OR2T12Q8NG77 320 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 C1orf216Q8TAB5 229 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 ZNF583Q96ND8 569 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 PAIP1Q9H074 479 aaKnown RBP17.11■□□□□ 0.33
SNX1-208ENST00000559844 TM9SF3Q9HD45 589 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 PPT2Q9UMR5 302 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 MUC6Q6W4X9 2439 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 RALGAPA1Q6GYQ0 2036 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 TRBV5-3A0A0A0MS03 114 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 EIF4E1BA6NMX2 242 aaKnown RBP17.11■□□□□ 0.33
SNX1-208ENST00000559844 ANXA6P08133 673 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 PIM1P11309 404 aaPredicted RBP17.11■□□□□ 0.33
SNX1-208ENST00000559844 ASMTP46597 345 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 POLE2P56282 527 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 TAP2Q03519 686 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 PDK3Q15120 406 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 PGS1Q32NB8 556 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 ABI3BPQ7Z7G0 1075 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 PACRGLQ8N7B6 248 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 SLC5A11Q8WWX8 675 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 GBP5Q96PP8 586 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 APOOQ9BUR5 198 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 LGR4Q9BXB1 951 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 COQ10BQ9H8M1 238 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 C8orf4Q9NR00 106 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 PHPT1Q9NRX4 125 aaPredicted RBP17.11■□□□□ 0.33
SNX1-208ENST00000559844 AGPAT4Q9NRZ5 378 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 TMEM74BQ9NUR3 256 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 SLC25A37Q9NYZ2 338 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 PDP2Q9P2J9 529 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 AP4B1Q9Y6B7 739 aa17.11■□□□□ 0.33
SNX1-208ENST00000559844 MAGEB17A8MXT2 336 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 FOXE1O00358 373 aaPredicted RBP17.1■□□□□ 0.33
SNX1-208ENST00000559844 GSTA4O15217 222 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 BCAT2O15382 392 aaPredicted RBP17.1■□□□□ 0.33
SNX1-208ENST00000559844 HSD17B2P37059 387 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 KIR3DL1P43629 444 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 PHEXP78562 749 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 LCTLQ6UWM7 567 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 Q6ZSR6 202 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 MSRB3Q8IXL7 192 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 LAS2Q8IYD9 372 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 RNF175Q8N4F7 328 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 OR13H1Q8NG92 308 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 HUS1BQ8NHY5 278 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 PIGKQ92643 395 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 TFGQ92734 400 aaPredicted RBP17.1■□□□□ 0.33
SNX1-208ENST00000559844 POP5Q969H6 163 aaKnown RBP17.1■□□□□ 0.33
SNX1-208ENST00000559844 UBE2E3Q969T4 207 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 ZNF597Q96LX8 424 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 EBPLQ9BY08 206 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 PIF1Q9H611 641 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 RPF2Q9H7B2 306 aaKnown RBP17.1■□□□□ 0.33
SNX1-208ENST00000559844 GORASP2Q9H8Y8 452 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 PRM3Q9NNZ6 103 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 SERHLQ9NQF3 203 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 RAB23Q9ULC3 237 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 CACNA1EQ15878 2313 aa17.1■□□□□ 0.33
SNX1-208ENST00000559844 CDH1P12830 882 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 CD38P28907 300 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 TRPC1P48995 793 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 CLCN2P51788 898 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 PHC1P78364 1004 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 TSTA3Q13630 321 aaPredicted RBP17.09■□□□□ 0.33
SNX1-208ENST00000559844 ARHGAP19Q14CB8 494 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 METRNLQ641Q3 311 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 NXPE4Q6UWF7 544 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 CHTF18Q8WVB6 975 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 C11orf24Q96F05 449 aaPredicted RBP17.09■□□□□ 0.33
SNX1-208ENST00000559844 CENPNQ96H22 339 aaPredicted RBP17.09■□□□□ 0.33
SNX1-208ENST00000559844 CPPED1Q9BRF8 314 aaPredicted RBP17.09■□□□□ 0.33
SNX1-208ENST00000559844 HAUS8Q9BT25 410 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 FAM120CQ9NX05 1096 aaKnown RBP17.09■□□□□ 0.33
SNX1-208ENST00000559844 PILRBQ9UKJ0 227 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 USP22Q9UPT9 525 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 PRKAB1Q9Y478 270 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 PCYT1BQ9Y5K3 369 aaPredicted RBP17.09■□□□□ 0.33
SNX1-208ENST00000559844 TDRD6O60522 2096 aaKnown RBP17.09■□□□□ 0.33
SNX1-208ENST00000559844 FAM220BPB1ANY3 271 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 CACNB4O00305 520 aaPredicted RBP17.09■□□□□ 0.33
SNX1-208ENST00000559844 SCELO95171 688 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 THEGLP0DJG4 465 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 MYCLP1P12525 358 aaPredicted RBP17.09■□□□□ 0.33
SNX1-208ENST00000559844 GNSP15586 552 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 RABIFP47224 123 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 SLBPQ14493 270 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNX1-208ENST00000559844 PRAMEF14Q5SWL7 426 aa17.09■□□□□ 0.33
SNX1-208ENST00000559844 INTS11Q5TA45 600 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms