RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 INPP5KQ9BT40 448 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 CARS2Q9HA77 564 aaKnown RBP12.43□□□□□ -0.42
SMAD3-207ENST00000558763 IMP3Q9NV31 184 aaKnown RBP12.43□□□□□ -0.42
SMAD3-207ENST00000558763 ZSCAN32Q9NX65 697 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 MOSPD1Q9UJG1 213 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 GPSM3Q9Y4H4 160 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 KNL1Q8NG31 2342 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 MDC1Q14676 2089 aaKnown RBP12.43□□□□□ -0.42
SMAD3-207ENST00000558763 AQP12BA6NM10 295 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 YY2O15391 372 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 PRICKLE3O43900 615 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-207ENST00000558763 ACADSP16219 412 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 PRPS1L1P21108 318 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 ATP6V1C1P21283 382 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 HTR1EP28566 365 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 TIA1P31483 386 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMAD3-207ENST00000558763 GRIA3P42263 894 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 PIK3CBP42338 1070 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 CDKN2CP42773 168 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 HNRNPFP52597 415 aaKnown RBP12.43□□□□□ -0.42
SMAD3-207ENST00000558763 TAF11Q15544 211 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 RPE65Q16518 533 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 MUM1Q2TAK8 710 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 ZNF528Q3MIS6 628 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 SPIN4Q56A73 249 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 RUNDC3AQ59EK9 446 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 THEMIS2Q5TEJ8 643 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 DNAJC14Q6Y2X3 702 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-207ENST00000558763 ABI3BPQ7Z7G0 1075 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 SYT12Q8IV01 421 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 AQP12AQ8IXF9 295 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 SLC22A18ASQ8N1D0 253 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 ANKRD53Q8N9V6 530 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 OR7A2PQ8NGA2 310 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 OR4K1Q8NGD4 311 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 SMPDL3AQ92484 453 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 NELL1Q92832 810 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 NAF1Q96HR8 494 aaKnown RBP12.43□□□□□ -0.42
SMAD3-207ENST00000558763 RSRC1Q96IZ7 334 aaKnown RBP12.43□□□□□ -0.42
SMAD3-207ENST00000558763 WDR92Q96MX6 357 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 ZNF583Q96ND8 569 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 MUC13Q9H3R2 512 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 PELI2Q9HAT8 420 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 TBC1D29Q9UFV1 150 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 ICKQ9UPZ9 632 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 HS3ST3A1Q9Y663 406 aa12.43□□□□□ -0.42
SMAD3-207ENST00000558763 A0A096LPI6 279 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 A6NCN8 305 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 ZNF839A8K0R7 811 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 THEGLP0DJG4 465 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 MTHFD1P11586 935 aaKnown RBP12.42□□□□□ -0.42
SMAD3-207ENST00000558763 IDSP22304 550 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 SLC7A1P30825 629 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 S100A3P33764 101 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 RABIFP47224 123 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 RAB28P51157 221 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 REEP5Q00765 189 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 LAPTM5Q13571 262 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 TRIP10Q15642 601 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 PLK5Q496M5 336 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 SFT2D3Q587I9 215 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 WDR45BQ5MNZ6 344 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 LYSMD4Q5XG99 296 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 OR4F3Q6IEY1 312 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 ENPP7Q6UWV6 458 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 IZUMO2Q6UXV1 221 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 TMIGD1Q6UXZ0 262 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 MSANTD1Q6ZTZ1 278 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 ANKRD46Q86W74 232 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 IFNEQ86WN2 208 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 C17orf64Q86WR6 236 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 GPR156Q8NFN8 814 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 OR8J2Q8NGG1 315 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 CCL4L1Q8NHW4 92 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 CANT1Q8WVQ1 401 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 FERD3LQ96RJ6 166 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 KCTD14Q9BQ13 255 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-207ENST00000558763 CPPED1Q9BRF8 314 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-207ENST00000558763 ZNF717Q9BY31 904 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-207ENST00000558763 REXO4Q9GZR2 422 aaKnown RBP12.42□□□□□ -0.42
SMAD3-207ENST00000558763 KCNH6Q9H252 994 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 RHBGQ9H310 441 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 OR51B5Q9H339 312 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 XKR8Q9H6D3 395 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 RPF2Q9H7B2 306 aaKnown RBP12.42□□□□□ -0.42
SMAD3-207ENST00000558763 COPS7BQ9H9Q2 264 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-207ENST00000558763 TM9SF3Q9HD45 589 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 PCDHB14Q9Y5E9 798 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 SNX13Q9Y5W8 968 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 ZNF318Q5VUA4 2279 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 GOLGA4Q13439 2230 aaKnown RBP12.42□□□□□ -0.42
SMAD3-207ENST00000558763 SPAG17Q6Q759 2223 aa12.42□□□□□ -0.42
SMAD3-207ENST00000558763 SCAMP2O15127 329 aaKnown RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 AKAP10O43572 662 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 TGFB1P01137 390 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 C1QCP02747 245 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 NCK1P16333 377 aa12.41□□□□□ -0.42
SMAD3-207ENST00000558763 AK4P27144 223 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-207ENST00000558763 HTR1BP28222 390 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms