RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 CAMKVQ8NCB2 501 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 SNIP1Q8TAD8 396 aaKnown RBP16.64■□□□□ 0.25
TPM1-214ENST00000558544 SLC13A3Q8WWT9 602 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 TM4SF19Q96DZ7 209 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 NAF1Q96HR8 494 aaKnown RBP16.64■□□□□ 0.25
TPM1-214ENST00000558544 ATP6V1G3Q96LB4 118 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 C10orf90Q96M02 699 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 NLNQ9BYT8 704 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 GSTO2Q9H4Y5 243 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 ENAMQ9NRM1 1142 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 CUTCQ9NTM9 273 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 TXLNGQ9NUQ3 528 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 WDR70Q9NW82 654 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 SRPK3Q9UPE1 567 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 RNF11Q9Y3C5 154 aa16.64■□□□□ 0.25
TPM1-214ENST00000558544 A0A1B0GTL3 188 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 TMEM120BA0PK00 339 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.63■□□□□ 0.25
TPM1-214ENST00000558544 UGDHO60701 494 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 ZWINTO95229 277 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 MED26O95402 600 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 CLDN9O95484 217 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 HBQ1P09105 142 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 HNF4AP41235 474 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 ARSFP54793 590 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 TGIF1Q15583 401 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 HIST2H2ACQ16777 129 aaPredicted RBP16.63■□□□□ 0.25
TPM1-214ENST00000558544 C1orf189Q5VU69 101 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 LIPJQ5W064 366 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 HIST2H2AA3Q6FI13 130 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 RHBDD2Q6NTF9 364 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 MED27Q6P2C8 311 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 TTLL10Q6ZVT0 673 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 NLGN4XQ8N0W4 816 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 DTWD1Q8N5C7 304 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 METTL27Q8N6F8 245 aaPredicted RBP16.63■□□□□ 0.25
TPM1-214ENST00000558544 ANKRD42Q8N9B4 389 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 NLGN4YQ8NFZ3 816 aaPredicted RBP16.63■□□□□ 0.25
TPM1-214ENST00000558544 OR4F6Q8NGB9 312 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 ZCCHC10Q8TBK6 192 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 ZCCHC14Q8WYQ9 949 aaKnown RBP16.63■□□□□ 0.25
TPM1-214ENST00000558544 CCT6BQ92526 530 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 PKNOX2Q96KN3 472 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 NTMT1Q9BV86 223 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 PITHD1Q9GZP4 211 aaPredicted RBP16.63■□□□□ 0.25
TPM1-214ENST00000558544 NT5DC2Q9H857 520 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 NDOR1Q9UHB4 597 aa16.63■□□□□ 0.25
TPM1-214ENST00000558544 ZNF490Q9ULM2 529 aaPredicted RBP16.63■□□□□ 0.25
TPM1-214ENST00000558544 LAMA5O15230 3695 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 ANKDD1BA6NHY2 528 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 TXNDC9O14530 226 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 TRIM13O60858 407 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 OTCP00480 354 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 PCNAP12004 261 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 ALAS2P22557 587 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 RORAP35398 523 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 CCR10P46092 362 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 MAP7Q14244 749 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 CPSF6Q16630 551 aaKnown RBP eCLIP16.62■□□□□ 0.25
TPM1-214ENST00000558544 FAM214AQ32MH5 1076 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 CFAP157Q5JU67 520 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 YOD1Q5VVQ6 348 aaPredicted RBP16.62■□□□□ 0.25
TPM1-214ENST00000558544 FAM219BQ5XKK7 198 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 FRMD7Q6ZUT3 714 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 DTX1Q86Y01 620 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 CACNA2D3Q8IZS8 1091 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 DSELQ8IZU8 1212 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 ESX1Q8N693 406 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 L3MBTL4Q8NA19 623 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 KCT2Q8NC54 265 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 ZNF248Q8NDW4 579 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 TTLQ8NG68 377 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 CREB3L4Q8TEY5 395 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 KCNE4Q8WWG9 221 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 UBE2E3Q969T4 207 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 GATA5Q9BWX5 397 aaPredicted RBP16.62■□□□□ 0.25
TPM1-214ENST00000558544 DRC3Q9H069 523 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 ACBD3Q9H3P7 528 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 AKIRIN1Q9H9L7 192 aaPredicted RBP16.62■□□□□ 0.25
TPM1-214ENST00000558544 PRM3Q9NNZ6 103 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 MLXIPLQ9NP71 852 aa16.62■□□□□ 0.25
TPM1-214ENST00000558544 MRPS2Q9Y399 296 aaKnown RBP16.62■□□□□ 0.25
TPM1-214ENST00000558544 A0A1B0GX78 115 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 WDR91A4D1P6 747 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 DSCR3O14972 297 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 OR4F21O95013 312 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 BPGMP07738 259 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 SERPINB4P48594 390 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 SNRPNP63162 240 aaKnown RBP16.61■□□□□ 0.25
TPM1-214ENST00000558544 RGS1Q08116 209 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 ASPHQ12797 758 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 LCP2Q13094 533 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 CLN3Q13286 438 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 PWP1Q13610 501 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 DDX39BQ13838 428 aaKnown RBP16.61■□□□□ 0.25
TPM1-214ENST00000558544 MUM1Q2TAK8 710 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 ZNF385CQ66K41 422 aaPredicted RBP16.61■□□□□ 0.25
TPM1-214ENST00000558544 LETMD1Q6P1Q0 360 aa16.61■□□□□ 0.25
TPM1-214ENST00000558544 ZCCHC23Q6ZST2 131 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms