RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CCNI2Q6ZMN8 369 aaPredicted RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 Q6ZSV7 163 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ADGRD2Q7Z7M1 963 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 TMPRSS12Q86WS5 348 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 PTOV1Q86YD1 416 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 GCNT2Q8N0V5 402 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 BBS5Q8N3I7 341 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 PRSS35Q8N3Z0 413 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ZNF397Q8NF99 534 aaPredicted RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 RDM1Q8NG50 284 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 OR10Q1Q8NGQ4 319 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 CHPT1Q8WUD6 406 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 UBTD2Q8WUN7 234 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 IRGQQ8WZA9 623 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ZNF75CPQ92670 426 aaPredicted RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 FBXO32Q969P5 355 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 PINX1Q96BK5 328 aaKnown RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 TMEM19Q96HH6 336 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 TXNDC15Q96J42 360 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 SGK494Q96LW2 274 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 C8orf49Q96NF6 230 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 PSKH2Q96QS6 385 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 SIGLEC11Q96RL6 698 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 SECISBP2Q96T21 854 aaKnown RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 BDH2Q9BUT1 245 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ALG12Q9BV10 488 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 EDEM2Q9BV94 578 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 NFKBIZQ9BYH8 718 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 ARRDC1-AS1Q9H2J1 176 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 KLK15Q9H2R5 256 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 RIMS4Q9H426 269 aaPredicted RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 DPEP3Q9H4B8 488 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 FZD3Q9NPG1 666 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 TCP11L1Q9NUJ3 509 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 DDX18Q9NVP1 670 aaKnown RBP3.54□□□□□ -1.84
TDP1-217ENST00000557782 BAIAP2L1Q9UHR4 511 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 TMED7Q9Y3B3 224 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 PCDHAC2Q9Y5I4 1007 aa3.54□□□□□ -1.84
TDP1-217ENST00000557782 SF3B1O75533 1304 aaKnown RBP eCLIP3.53□□□□□ -1.844e-7■■■■■ 133.7
TDP1-217ENST00000557782 IL16Q14005 1332 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 A0A0U1RQV5 110 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 A0A1W2PRB8 838 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 CCDC162PA2VCL2 907 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 ERICH4A6NGS2 130 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 E5RGE8 158 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 K7ESM1 405 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 CYR61O00622 381 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 PRRG1O14668 218 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 OGTO15294 1046 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 RFPL2O75678 378 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 SURF6O75683 361 aaKnown RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 CIB2O75838 187 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 SOX30O94993 753 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 PAPSS2O95340 614 aaPredicted RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 SYNGR4O95473 234 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 CYP1A2P05177 515 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 HMBSP08397 361 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 KRT19P08727 400 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 IQCF3P0C7M6 154 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 ACP2P11117 423 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 GZMAP12544 262 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 INSRRP14616 1297 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 GOT1P17174 413 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 CKMT2P17540 419 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 DPP4P27487 766 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 FCGR2BP31994 310 aaPredicted RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 PRDX2P32119 198 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 ADRA1AP35348 466 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 TAGLN2P37802 199 aaKnown RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 CETN2P41208 172 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 SLC1A3P43003 542 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 CCL11P51671 97 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 SEC61A1P61619 476 aaKnown RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 HERV-K104P63124 156 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 DGCR2P98153 550 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 CDH18Q13634 790 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 KEAP1Q14145 624 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 PDK3Q15120 406 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 PPP1R7Q15435 360 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 CCDC57Q2TAC2 916 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 ZC2HC1CQ53FD0 456 aaPredicted RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 ASPRV1Q53RT3 343 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 FSCBQ5H9T9 825 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 WASHC2DQ5SRD0 308 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 FAM69BQ5VUD6 431 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 HIST2H2AA3Q6FI13 130 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 OGFOD2Q6N063 350 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 FAM122CQ6P4D5 195 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 FIP1L1Q6UN15 594 aaKnown RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 PACS1Q6VY07 963 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 PRUNE1Q86TP1 453 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 GLCCI1Q86VQ1 547 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 VRK3Q8IV63 474 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 TDHQ8IZJ6 230 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 CDK20Q8IZL9 346 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 TMEM99Q8N816 258 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 RNF149Q8NC42 400 aa3.53□□□□□ -1.84
TDP1-217ENST00000557782 ZNF548Q8NEK5 533 aaPredicted RBP3.53□□□□□ -1.84
TDP1-217ENST00000557782 TRIM58Q8NG06 486 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms