RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CENPVL1A0A0U1RR11 272 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 A0A1B0GVG6 124 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PIPSLA2A3N6 862 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CCDC162PA2VCL2 907 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 MYADML2A6NDP7 307 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 OR6C75A6NL08 312 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TBKBP1A7MCY6 615 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 H0YAE9 185 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 M0QZQ0 153 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 NME4O00746 187 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SOCS2O14508 198 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RAD51BO15315 384 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RGS14O43566 566 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SYNCRIPO60506 623 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 EEDO75530 441 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 NDST3O95803 873 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 NUDT3O95989 172 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 BCL10O95999 233 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 EPOP01588 193 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RHOCP08134 193 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 HMBSP08397 361 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 FGF4P08620 206 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RPS17P08708 135 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ALDOCP09972 364 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 LINC00032P0C843 101 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 HKR1P10072 659 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 NELFEP18615 380 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CCNA2P20248 432 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 MSH3P20585 1137 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CAPN3P20807 821 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 NFKBIAP25963 317 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CST5P28325 142 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 HTR1EP28566 365 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CD38P28907 300 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 OR1E1P30953 314 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SLC5A2P31639 672 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RFC2P35250 354 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 THPOP40225 353 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PBX3P40426 434 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CASRP41180 1078 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 BRCC3P46736 316 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SERPINB10P48595 397 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PIK3CGP48736 1102 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SLC11A2P49281 568 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 MRPL19P49406 292 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RGS4P49798 205 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 GSK3BP49841 420 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RAD23AP54725 363 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CDKN2DP55273 166 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CDH13P55290 713 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CCL23P55773 120 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 C21orf59P57076 290 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 GABARAPL2P60520 117 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 IL2P60568 153 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 BEX3Q00994 111 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ACVR1Q04771 509 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 LIPEQ05469 1076 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ITGA7Q13683 1181 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 DAG1Q14118 895 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 RCAN2Q14206 197 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 GK3PQ14409 553 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 GALNT3Q14435 633 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TAF1AQ15573 450 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TYSND1Q2T9J0 566 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TTLL9Q3SXZ7 439 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SLC36A3Q495N2 470 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 FUT11Q495W5 492 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 VPS26BQ4G0F5 336 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ZRANB3Q5FWF4 1079 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 MS4A13Q5J8X5 152 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 C10orf120Q5SQS8 335 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CCNYL2Q5T2Q4 361 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CACHD1Q5VU97 1274 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TTC23Q5W5X9 447 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 PTRHD1Q6GMV3 140 aaKnown RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 CCSAPQ6IQ19 270 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF280DQ6N043 979 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 HMBOX1Q6NT76 420 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 C8orf82Q6P1X6 216 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF549Q6P9A3 640 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF773Q6PK81 442 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 DHRS4L2Q6PKH6 230 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 KCTD8Q6ZWB6 473 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ADAMTSL2Q86TH1 951 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 GPR180Q86V85 440 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 GPSM1Q86YR5 675 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 GALNT13Q8IUC8 556 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 VRK3Q8IV63 474 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ADGRG5Q8IZF4 528 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 EID3Q8N140 333 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SVOPLQ8N434 492 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TEX26Q8N6G2 289 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SNX31Q8N9S9 440 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SMYD1Q8NB12 490 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SETD9Q8NE22 299 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 KLHDC9Q8NEP7 349 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 TRPV3Q8NET8 790 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 OR13J1Q8NGT2 312 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 SCAMP5Q8TAC9 235 aa4.28□□□□□ -1.72
ATXN3-241ENST00000556374 ITFG1Q8TB96 612 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms