RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ANKHQ9HCJ1 492 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 PAK6Q9NQU5 681 aaPredicted RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 SPATA6Q9NWH7 488 aaPredicted RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 TRNAU1APQ9NX07 287 aaKnown RBP6.76□□□□□ -1.33
TDP1-213ENST00000555880 FAM8A1Q9UBU6 413 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 CD84Q9UIB8 345 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 BTNL2Q9UIR0 455 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 OGDHLQ9ULD0 1010 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 CLEC4EQ9ULY5 219 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 PCDHGB3Q9Y5G1 929 aa6.76□□□□□ -1.33
TDP1-213ENST00000555880 H0YIV9 168 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ADAMDEC1O15204 470 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 CXCL10P02778 98 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 FUCA1P04066 466 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 LAMP1P11279 417 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 XPAP23025 273 aaPredicted RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 PTX3P26022 381 aaPredicted RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 VIPR1P32241 457 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 PCGF2P35227 344 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 IDUAP35475 653 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 KRT20P35900 424 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 CLK1P49759 484 aaKnown RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 SMCPP49901 116 aaPredicted RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 CCR3P51677 355 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 PNLIPRP1P54315 467 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 MLLT10P55197 1068 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 DCDC1P59894 354 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 VBP1P61758 197 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 LSM3P62310 102 aaKnown RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 RPP38P78345 283 aaKnown RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 ELP6Q0PNE2 266 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 CBX3Q13185 183 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 DOC2AQ14183 400 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ZXDCQ2QGD7 858 aaPredicted RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 ZNF284Q2VY69 593 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ADPRMQ3LIE5 342 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 LRRC73Q5JTD7 316 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 GRHL2Q6ISB3 625 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 AGTRAPQ6RW13 159 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ANGPTL8Q6UXH0 198 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 SLC39A5Q6ZMH5 540 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 DPY19L3Q6ZPD9 716 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ZNF551Q7Z340 670 aaPredicted RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 GALNT10Q86SR1 603 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 PTOV1Q86YD1 416 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 NPAS3Q8IXF0 933 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 CLECL1Q8IZS7 167 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 SLC39A11Q8N1S5 342 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 SYNPOQ8N3V7 929 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 CPA6Q8N4T0 437 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ZNF557Q8N988 423 aaPredicted RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 OR4A15Q8NGL6 344 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 PHF10Q8WUB8 498 aaKnown RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 MYDGFQ969H8 173 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ITPKCQ96DU7 683 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ZHX1-C8orf76Q96EF9 292 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 PITX2Q99697 317 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 BARD1Q99728 777 aaKnown RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 DPH2Q9BQC3 489 aaPredicted RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 ZSCAN5AQ9BUG6 496 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ACOT13Q9NPJ3 140 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 AKIP1Q9NQ31 210 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 FBXO8Q9NRD0 319 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.75□□□□□ -1.33
TDP1-213ENST00000555880 RASSF1Q9NS23 344 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 GIN1Q9NXP7 522 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 SPG21Q9NZD8 308 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ZNF282Q9UDV7 671 aaPredicted RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 FBXO10Q9UK96 956 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 FZD4Q9ULV1 537 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 DOLKQ9UPQ8 538 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 PADI2Q9Y2J8 665 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 HELZP42694 1942 aaKnown RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 OR2AG2A6NM03 316 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ZBBXA8MT70 800 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 EFCAB9A8MZ26 197 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 E7EQ34 232 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 LEFTY2O00292 366 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 TOR1BO14657 336 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ZNF197O14709 1029 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 SCN2BO60939 215 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ATG13O75143 517 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 MTX2O75431 263 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 PSIP1O75475 530 aaKnown RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 SLCO2B1O94956 709 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 SRPRAP08240 638 aaKnown RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 CD36P16671 472 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ITGA2P17301 1181 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 LAG3P18627 525 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 ALDH4A1P30038 563 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 HLA-FP30511 346 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 HOXA9P31269 272 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 RPL3P39023 403 aaKnown RBP6.75□□□□□ -1.33
TDP1-213ENST00000555880 WNT3P56703 355 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 TUBA1BP68363 451 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 FADDQ13158 208 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 NAE1Q13564 534 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 INAQ16352 499 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 SERPINA13PQ6UXR4 307 aa6.75□□□□□ -1.33
TDP1-213ENST00000555880 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms