RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 U3KQA8 63 aa10.73□□□□□ -0.69
SHMT2-220ENST00000555634 KCNE1BA0A087WTH5 132 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 A0A0J9YVX5 310 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 PPP6CO00743 305 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 B4GAT1O43505 415 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 SEMA3DO95025 777 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 THRAP10827 490 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 PVRP15151 417 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 DRD4P21917 467 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 ARRB2P32121 409 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 BCL6P41182 706 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 SCTRP47872 440 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 SEPHS1P49903 392 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 FOXA1P55317 472 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 PPP1CAP62136 330 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 ABRAXAS2Q15018 415 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 RPS6KA2Q15349 733 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 TRIP6Q15654 476 aaKnown RBP10.72□□□□□ -0.69
SHMT2-220ENST00000555634 SMU1Q2TAY7 513 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 GALNTL6Q49A17 601 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 MANEAQ5SRI9 462 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 CES4AQ5XG92 561 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 CSNK1A1LQ8N752 337 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 FNDC5Q8NAU1 212 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 OR8K5Q8NH50 307 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 CEP70Q8NHQ1 597 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 FLVCR1-AS1Q8TAF5 88 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 ZNF473Q8WTR7 871 aaKnown RBP10.72□□□□□ -0.69
SHMT2-220ENST00000555634 SLC13A3Q8WWT9 602 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 STARD8Q92502 1023 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 GAL3ST3Q96A11 431 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 MTFMTQ96DP5 389 aaKnown RBP10.72□□□□□ -0.69
SHMT2-220ENST00000555634 DEPDC7Q96QD5 511 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 NRTNQ99748 197 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 CCDC28BQ9BUN5 200 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 SARGQ9BW04 601 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 TWSG1Q9GZX9 223 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 CHRNA10Q9GZZ6 450 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 RHBGQ9H310 441 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 RXFP3Q9NSD7 469 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 C1orf109Q9NX04 203 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 NOP53Q9NZM5 478 aaKnown RBP10.72□□□□□ -0.69
SHMT2-220ENST00000555634 ATXN7L1Q9ULK2 861 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-220ENST00000555634 AP1M2Q9Y6Q5 423 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 SPACA6W5XKT8 324 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 LAMA1P25391 3075 aa10.72□□□□□ -0.69
SHMT2-220ENST00000555634 IGKV1-8A0A0C4DH67 115 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 SERTM1A2A2V5 107 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 A8MU76 341 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 MAGEB17A8MXT2 336 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 SNX3O60493 162 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 SRPX2O60687 465 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 CCDC22O60826 627 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 SEC22BO75396 215 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 EIF2S1P05198 315 aaKnown RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 SERPINA6P08185 405 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 LBPP18428 481 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 CD22P20273 847 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 CSRP1P21291 193 aaKnown RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 SERPINB3P29508 390 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 SSR2P43308 183 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 TSFMP43897 325 aaKnown RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 GSTM5P46439 218 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 ARFIP1P53367 373 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 RPS13P62277 151 aaKnown RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 ERVK-8P63133 956 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 RPL38P63173 70 aaKnown RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 GABPB1Q06547 395 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 TUBB3Q13509 450 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 CUL3Q13618 768 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 GRM7Q14831 915 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 TOR1AIP1Q5JTV8 583 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 TCHHL1Q5QJ38 904 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 KHDRBS2Q5VWX1 349 aaKnown RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 FCRL6Q6DN72 434 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 EPGNQ6UW88 154 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 ASCL5Q7RTU5 278 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 TRIM46Q7Z4K8 759 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 SPATA19Q7Z5L4 167 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 GLRX5Q86SX6 157 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 NUDT13Q86X67 352 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 FAM20CQ8IXL6 584 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 KIAA2013Q8IYS2 634 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 AGBL5Q8NDL9 886 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 WDR20Q8TBZ3 569 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 ACTRT2Q8TDY3 377 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 RGMAQ96B86 450 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 KCNC2Q96PR1 638 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 HBEGFQ99075 208 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 CMKLR1Q99788 373 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 REXO4Q9GZR2 422 aaKnown RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 RABEP2Q9H5N1 569 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 LRTM1Q9HBL6 345 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 SERTAD3Q9UJW9 196 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 ZNF225Q9UK10 706 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 SRPK3Q9UPE1 567 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 MAPRE3Q9UPY8 281 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 RUVBL1Q9Y265 456 aaKnown RBP10.71□□□□□ -0.69
SHMT2-220ENST00000555634 KLHL20Q9Y2M5 609 aa10.71□□□□□ -0.69
SHMT2-220ENST00000555634 VPS13AQ96RL7 3174 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms