RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 HCN4Q9Y3Q4 1203 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 A0A1W2PRQ8 180 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 SEMG2Q02383 582 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 RAB39AQ14964 217 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 MINDY4Q4G0A6 757 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 GXYLT1Q4G148 440 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF782Q6ZMW2 699 aaPredicted RBP13.54□□□□□ -0.24
VTI1B-204ENST00000554659 GOLM1Q8NBJ4 401 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 PEX13Q92968 403 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 CCDC120Q96HB5 630 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 XKR8Q9H6D3 395 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 CYB5AP00167 134 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 VIPR1P32241 457 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 LEPRP48357 1165 aaKnown RBP13.54□□□□□ -0.24
VTI1B-204ENST00000554659 MASP1P48740 699 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 CLCN7P51798 805 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ST3GAL3Q11203 375 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 SLC13A2Q13183 592 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ARFRP1Q13795 201 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 DEFB115Q30KQ5 88 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 CYBRD1Q53TN4 286 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 CEACAM20Q6UY09 585 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 NUP54Q7Z3B4 507 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 SLC7A6OSQ96CW6 309 aaPredicted RBP13.54□□□□□ -0.24
VTI1B-204ENST00000554659 RIPOR3Q96MK2 946 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 NDC1Q9BTX1 674 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF350Q9GZX5 532 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 NSUN3Q9H649 340 aaKnown RBP13.54□□□□□ -0.24
VTI1B-204ENST00000554659 RNF11Q9Y3C5 154 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 RICTORQ6R327 1708 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 FAM170BA6NMN3 283 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 HTR1EP28566 365 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 PTCHD3Q3KNS1 767 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 TECRLQ5HYJ1 363 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ATG9BQ674R7 924 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 DGLUCYQ7Z3D6 616 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 GALNT12Q8IXK2 581 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 RELTQ969Z4 430 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 MUS81Q96NY9 551 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 DENRO43583 198 aaKnown RBP13.54□□□□□ -0.24
VTI1B-204ENST00000554659 XPNPEP2O43895 674 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ALAS2P22557 587 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 GDF5P43026 501 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 KCNC3Q14003 757 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 PUM1Q14671 1186 aaKnown RBP eCLIP13.54□□□□□ -0.241e-6■□□□□ 9.7
VTI1B-204ENST00000554659 C6orf136Q5SQH8 315 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 EIF5AL1Q6IS14 154 aaKnown RBP13.54□□□□□ -0.24
VTI1B-204ENST00000554659 VITQ6UXI7 678 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 LRRC69Q6ZNQ3 347 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 TPRG1Q6ZUI0 275 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 SLC37A3Q8NCC5 494 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 KREMEN2Q8NCW0 462 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 OR2L2Q8NH16 312 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 RHEBL1Q8TAI7 183 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ASB12Q8WXK4 309 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 PMEPA1Q969W9 287 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF700Q9H0M5 742 aa13.54□□□□□ -0.24
VTI1B-204ENST00000554659 DLGAP1O14490 977 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF182P17025 639 aaPredicted RBP13.53□□□□□ -0.24
VTI1B-204ENST00000554659 PPP1R3AQ16821 1122 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 FAM76BQ5HYJ3 339 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 FOXRED2Q8IWF2 684 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 ZNF676Q8N7Q3 588 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 GAL3ST4Q96RP7 486 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 FUZQ9BT04 418 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 GKN1Q9NS71 199 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 COPS7AQ9UBW8 275 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 GIMAP2Q9UG22 337 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 CNOT11Q9UKZ1 510 aaKnown RBP13.53□□□□□ -0.24
VTI1B-204ENST00000554659 HSPB11Q9Y547 144 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 YIPF1Q9Y548 306 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 PCDHB3Q9Y5E6 796 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 ELOA3DA6NLF2 546 aaPredicted RBP13.53□□□□□ -0.24
VTI1B-204ENST00000554659 L7N2F9 121 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 DFNA5O60443 496 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 DIRAS1O95057 198 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 CLDN7O95471 211 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 TCEA1P23193 301 aaKnown RBP13.53□□□□□ -0.24
VTI1B-204ENST00000554659 VAMP2P63027 116 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 LRRC32Q14392 662 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 ELOA3BQ3SY89 546 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 SLC8B1Q6J4K2 584 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 ARL9Q6T311 187 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 RASGEF1AQ8N9B8 481 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 ELOA3Q8NG57 546 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 ARMC5Q96C12 935 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 BARD1Q99728 777 aaKnown RBP13.53□□□□□ -0.24
VTI1B-204ENST00000554659 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 MGAT4BQ9UQ53 548 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 A0A0U1RQF3 1178 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 SRCP12931 536 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 RASGEF1BQ0VAM2 473 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 CDHR3Q6ZTQ4 885 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 SH3RF2Q8TEC5 729 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 RIT1Q92963 219 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 BIRC8Q96P09 236 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 FCRL3Q96P31 734 aaPredicted RBP13.53□□□□□ -0.24
VTI1B-204ENST00000554659 BTBD1Q9H0C5 482 aa13.53□□□□□ -0.24
VTI1B-204ENST00000554659 Q9Y3F1 56 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms