RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 H3BMH7 237 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 FAAHO00519 579 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TOR1BO14657 336 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 HAT1O14929 419 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 RAD51BO15315 384 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 GSTZ1O43708 216 aaPredicted RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PCDHGA12O60330 932 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SYNCRIPO60506 623 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 RECQL5O94762 991 aaPredicted RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 KCNK2O95069 426 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SIX3O95343 332 aaPredicted RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 VIPR1P32241 457 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MC4RP32245 332 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 THBS2P35442 1172 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ASMTP46597 345 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CTBP2P56545 445 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SIM1P81133 766 aaPredicted RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PLAURQ03405 335 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 LAPTM5Q13571 262 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MAP7Q14244 749 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 NR1D2Q14995 579 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CLCA4Q14CN2 919 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 RGNQ15493 299 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PHKG1Q16816 387 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PAN2Q504Q3 1202 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 C3orf38Q5JPI3 329 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 FGD3Q5JSP0 725 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TBCELQ5QJ74 424 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 OR2T5Q6IEZ7 315 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 BRAT1Q6PJG6 821 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 VITQ6UXI7 678 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 GPSM1Q86YR5 675 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 GRAMD2AQ8IUY3 354 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CENPSQ8N2Z9 138 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 EXD3Q8N9H8 876 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ZSCAN1Q8NBB4 408 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SIDT2Q8NBJ9 832 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 FAM71CQ8NEG0 241 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 OR2T29Q8NH02 315 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 LPPQ93052 612 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PYCR2Q96C36 320 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MS4A3Q96HJ5 214 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 C10orf90Q96M02 699 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CCDC138Q96M89 665 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 OPALINQ96PE5 141 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CIB1Q99828 191 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MAPKAP1Q9BPZ7 522 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TTPALQ9BTX7 342 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 DOHHQ9BU89 302 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 POLDIP3Q9BY77 421 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 NAA50Q9GZZ1 169 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MID1IP1Q9NPA3 183 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TMEM184CQ9NVA4 438 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MPP6Q9NZW5 540 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 KLK14Q9P0G3 267 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 MBD1Q9UIS9 605 aaPredicted RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ANAPC10Q9UM13 185 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 DLGAP4Q9Y2H0 992 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 HYKKA2RU49 373 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 HTR3EA5X5Y0 456 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 OR51F1A6NGY5 319 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TMX2-CTNND1H3BSU7 103 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 OR1I1O60431 355 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CLDN9O95484 217 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PRSS56P0CW18 603 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CCNA2P20248 432 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 IMPA1P29218 277 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 UGT1A3P35503 534 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ATP5C1P36542 298 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 HPCAL1P37235 193 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 RPL3P39023 403 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CAPZA2P47755 286 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 RFX2P48378 723 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ALDH7A1P49419 539 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ENTPD1P49961 510 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 RPS14P62263 151 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ZNF155Q12901 538 aaPredicted RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TAF10Q12962 218 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TRIM32Q13049 653 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SELENBP1Q13228 472 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 NME3Q13232 169 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 KCNAB2Q13303 367 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 FAM98BQ52LJ0 330 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 TMEM215Q68D42 235 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ZBTB49Q6ZSB9 765 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 GET4Q7L5D6 327 aaPredicted RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ADHFE1Q8IWW8 467 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 UBQLNLQ8IYU4 475 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PAF1Q8N7H5 531 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ANGPTL6Q8NI99 470 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ADAM32Q8TC27 787 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 CELF6Q96J87 481 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 HIC2Q96JB3 615 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 OR2A14Q96R47 310 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 SNX18Q96RF0 628 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 BARD1Q99728 777 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ADAM2Q99965 735 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 PAIP2Q9BPZ3 127 aaKnown RBP3.31□□□□□ -1.88
SEC23A-207ENST00000554615 ERVMER34-1Q9H9K5 563 aa3.31□□□□□ -1.88
SEC23A-207ENST00000554615 NT5MQ9NPB1 228 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms