RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 OR5H6Q8NGV6 325 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 DTD1Q8TEA8 209 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 HASPINQ8TF76 798 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 DNAJA4Q8WW22 397 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PIK3R3Q92569 461 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 JADE3Q92613 823 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 STAMQ92783 540 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 UFD1Q92890 307 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ATP2A3Q93084 1043 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PTP4A1Q93096 173 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TESCQ96BS2 214 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 LURAP1Q96LR2 239 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF285Q96NJ3 590 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF317Q96PQ6 595 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 BTBD9Q96Q07 612 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TRNT1Q96Q11 434 aaKnown RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TGS1Q96RS0 853 aaKnown RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TREX2Q9BQ50 279 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ECSITQ9BQ95 431 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ZNF251Q9BRH9 671 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PELOQ9BRX2 385 aaKnown RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 EFHD1Q9BUP0 239 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 EDEM2Q9BV94 578 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 C11orf54Q9H0W9 315 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 SLC26A1Q9H2B4 701 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 COG4Q9H9E3 785 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PCDH9Q9HC56 1237 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 MAGEE1Q9HCI5 957 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 EPB41L5Q9HCM4 733 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 MLXIPLQ9NP71 852 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TREM1Q9NP99 234 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 IL26Q9NPH9 171 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PRDM8Q9NQV8 689 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 PCDHB16Q9NRJ7 776 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 VPS45Q9NRW7 570 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 NRBP2Q9NSY0 501 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 NDE1Q9NXR1 346 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 COA4Q9NYJ1 87 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 NPAP1Q9NZP6 1156 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 EIF3KQ9UBQ5 218 aaKnown RBP4.28□□□□□ -1.72
ATXN3-227ENST00000554491 DCDC2Q9UHG0 476 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 MAD2L2Q9UI95 211 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 MID2Q9UJV3 735 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 APPL1Q9UKG1 709 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 ST3GAL5Q9UNP4 418 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CDYLQ9Y232 598 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 TNFSF13BQ9Y275 285 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 SNX13Q9Y5W8 968 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 SLC22A7Q9Y694 548 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 CEPT1Q9Y6K0 416 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 NAV1Q8NEY1 1877 aa4.28□□□□□ -1.72
ATXN3-227ENST00000554491 MYO7AQ13402 2215 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 MAST4O15021 2626 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZMYM6O95789 1325 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF729A6NN14 1252 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 LINC00473A8K010 186 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 C12orf71A8MTZ7 269 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 FAM171A2A8MVW0 826 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 VWC2LB2RUY7 222 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 E7EWF7 191 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ZNF197O14709 1029 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 TFECO14948 347 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 SLC31A2O15432 143 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ASNA1O43681 348 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 SNX3O60493 162 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 UGDHO60701 494 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 FMO6PO60774 539 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PPP6R2O75170 966 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CSDE1O75534 798 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PRKD3O94806 890 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 RHOBTB1O94844 696 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 OR6B1O95007 311 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 RPP14O95059 124 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 AGFG2O95081 481 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 TGM6O95932 706 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 TBX18O95935 607 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 IFNB1P01574 187 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 AFPP02771 609 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 IFNA4P05014 189 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CDK1P06493 297 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CHRM2P08172 466 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CHRM5P08912 532 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CD63P08962 238 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 SBK3P0C264 359 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 HSPD1P10809 573 aaKnown RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 MYCLP12524 364 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-227ENST00000554491 UQCRBP14927 111 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CYP11B1P15538 503 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CPN2P22792 545 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 MARK3P27448 753 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 RBL1P28749 1068 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 CCND2P30279 289 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 AVPR2P30518 371 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 SLC7A1P30825 629 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 HMGCLP35914 325 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PPP3CCP48454 512 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 ITGA8P53708 1063 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 SLC5A3P53794 718 aa4.27□□□□□ -1.73
ATXN3-227ENST00000554491 PRRX1P54821 245 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms