RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 CAVIN3Q969G5 261 aa27.04■■□□□ 1.92
PCNX1-206ENST00000554292 MRPL57Q9BQC6 102 aaKnown RBP27.04■■□□□ 1.92
PCNX1-206ENST00000554292 ARHGAP9Q9BRR9 750 aa27.04■■□□□ 1.92
PCNX1-206ENST00000554292 EFCAB11Q9BUY7 163 aa27.04■■□□□ 1.92
PCNX1-206ENST00000554292 MRPL46Q9H2W6 279 aaKnown RBP27.04■■□□□ 1.92
PCNX1-206ENST00000554292 SLC22A11Q9NSA0 550 aa27.04■■□□□ 1.92
PCNX1-206ENST00000554292 ZNF358Q9NW07 568 aa27.04■■□□□ 1.92
PCNX1-206ENST00000554292 XPR1Q9UBH6 696 aa27.04■■□□□ 1.92
PCNX1-206ENST00000554292 ANGPTL3Q9Y5C1 460 aa27.04■■□□□ 1.92
PCNX1-206ENST00000554292 MAU2Q9Y6X3 613 aa27.04■■□□□ 1.92
PCNX1-206ENST00000554292 NDUFS4O43181 175 aa27.03■■□□□ 1.92
PCNX1-206ENST00000554292 SMIM24O75264 130 aa27.03■■□□□ 1.92
PCNX1-206ENST00000554292 MED26O95402 600 aa27.03■■□□□ 1.92
PCNX1-206ENST00000554292 VARSP26640 1264 aaKnown RBP27.03■■□□□ 1.92
PCNX1-206ENST00000554292 NFKB2Q00653 900 aa27.03■■□□□ 1.92
PCNX1-206ENST00000554292 DSG2Q14126 1118 aa27.03■■□□□ 1.92
PCNX1-206ENST00000554292 RBBP5Q15291 538 aaKnown RBP27.03■■□□□ 1.92
PCNX1-206ENST00000554292 PAGE2BQ5JRK9 111 aa27.03■■□□□ 1.92
PCNX1-206ENST00000554292 ATP1A1-AS1Q5TC04 95 aa27.03■■□□□ 1.92
PCNX1-206ENST00000554292 TMEM214Q6NUQ4 689 aaKnown RBP27.03■■□□□ 1.92
PCNX1-206ENST00000554292 COX15Q7KZN9 410 aa27.03■■□□□ 1.92
PCNX1-206ENST00000554292 LSM14AQ8ND56 463 aaKnown RBP27.03■■□□□ 1.92
PCNX1-206ENST00000554292 ZDHHC19Q8WVZ1 309 aaPredicted RBP27.03■■□□□ 1.92
PCNX1-206ENST00000554292 PTCD3Q96EY7 689 aaKnown RBP27.03■■□□□ 1.92
PCNX1-206ENST00000554292 SPNS1Q9H2V7 528 aa27.03■■□□□ 1.92
PCNX1-206ENST00000554292 NT5DC2Q9H857 520 aa27.03■■□□□ 1.92
PCNX1-206ENST00000554292 GEMIN8Q9NWZ8 242 aaKnown RBP27.03■■□□□ 1.92
PCNX1-206ENST00000554292 NBEAQ8NFP9 2946 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 CDH16O75309 829 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 KLF7O75840 302 aaPredicted RBP27.02■■□□□ 1.92
PCNX1-206ENST00000554292 STATHP02808 62 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 EPB42P16452 691 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 PIK3CGP48736 1102 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 AGTR2P50052 363 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 SKP1P63208 163 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 IRF8Q02556 426 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 OCA2Q04671 838 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 LAPTM5Q13571 262 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 IL10RAQ13651 578 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 SLBPQ14493 270 aaKnown RBP eCLIP27.02■■□□□ 1.92
PCNX1-206ENST00000554292 NAA30Q147X3 362 aaPredicted RBP27.02■■□□□ 1.92
PCNX1-206ENST00000554292 TBR1Q16650 682 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 DEFB109BQ30KR1 87 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 XKR6Q5GH73 641 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 TMIGD1Q6UXZ0 262 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 NT5CQ8TCD5 201 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 EXTL1Q92935 676 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 WDR34Q96EX3 536 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 MMABQ96EY8 250 aaPredicted RBP27.02■■□□□ 1.92
PCNX1-206ENST00000554292 SEC16BQ96JE7 1060 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 PARD6BQ9BYG5 372 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 ANKHQ9HCJ1 492 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 ZNF282Q9UDV7 671 aaPredicted RBP27.02■■□□□ 1.92
PCNX1-206ENST00000554292 MAN2B2Q9Y2E5 1009 aa27.02■■□□□ 1.92
PCNX1-206ENST00000554292 SCN3AQ9NY46 2000 aa27.01■■□□□ 1.91
PCNX1-206ENST00000554292 URADA6NGE7 173 aa27.01■■□□□ 1.91
PCNX1-206ENST00000554292 SERPIND1P05546 499 aa27.01■■□□□ 1.91
PCNX1-206ENST00000554292 NUDT17P0C025 328 aa27.01■■□□□ 1.91
PCNX1-206ENST00000554292 CCR10P46092 362 aa27.01■■□□□ 1.91
PCNX1-206ENST00000554292 TBCCQ15814 346 aa27.01■■□□□ 1.91
PCNX1-206ENST00000554292 NIPAL1Q6NVV3 410 aa27.01■■□□□ 1.91
PCNX1-206ENST00000554292 APOBEC4Q8WW27 367 aaKnown RBP27.01■■□□□ 1.91
PCNX1-206ENST00000554292 IP6K3Q96PC2 410 aa27.01■■□□□ 1.91
PCNX1-206ENST00000554292 SLC22A7Q9Y694 548 aa27.01■■□□□ 1.91
PCNX1-206ENST00000554292 IGSF10Q6WRI0 2623 aa27.01■■□□□ 1.91
PCNX1-206ENST00000554292 A0A0A6YYC8 382 aaPredicted RBP27■■□□□ 1.91
PCNX1-206ENST00000554292 SMIM23A6NLE4 172 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 H0YIG0 161 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 I3L1I5 382 aaPredicted RBP27■■□□□ 1.91
PCNX1-206ENST00000554292 ATXN7O15265 892 aaPredicted RBP27■■□□□ 1.91
PCNX1-206ENST00000554292 FOXS1O43638 330 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 NSA2O95478 260 aaKnown RBP27■■□□□ 1.91
PCNX1-206ENST00000554292 GSTA1P08263 222 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 KRT15P19012 456 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 SLCO1A2P46721 670 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 SSPNQ14714 243 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 HERC3Q15034 1050 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 PCBP2Q15366 365 aaKnown RBP eCLIP27■■□□□ 1.913e-7■■■■■ 52.4
PCNX1-206ENST00000554292 NKG7Q16617 165 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 HIST2H2ACQ16777 129 aaPredicted RBP27■■□□□ 1.91
PCNX1-206ENST00000554292 HIST2H2AA3Q6FI13 130 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 DTWD1Q8N5C7 304 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 KCT2Q8NC54 265 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 ZCCHC10Q8TBK6 192 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 COPG2Q9UBF2 871 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 CTSFQ9UBX1 484 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 MAP4K5Q9Y4K4 846 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 ASB1Q9Y576 335 aa27■■□□□ 1.91
PCNX1-206ENST00000554292 STX16-NPEPL1H3BU86 382 aa26.99■■□□□ 1.91
PCNX1-206ENST00000554292 STX16O14662 325 aa26.99■■□□□ 1.91
PCNX1-206ENST00000554292 FURINP09958 794 aa26.99■■□□□ 1.91
PCNX1-206ENST00000554292 HPDP32754 393 aaPredicted RBP26.99■■□□□ 1.91
PCNX1-206ENST00000554292 IFFO1Q0D2I5 559 aa26.99■■□□□ 1.91
PCNX1-206ENST00000554292 CHIT1Q13231 466 aa26.99■■□□□ 1.91
PCNX1-206ENST00000554292 DOC2AQ14183 400 aa26.99■■□□□ 1.91
PCNX1-206ENST00000554292 RIBC1Q8N443 379 aaPredicted RBP26.99■■□□□ 1.91
PCNX1-206ENST00000554292 TEX9Q8N6V9 391 aa26.99■■□□□ 1.91
PCNX1-206ENST00000554292 PTGR2Q8N8N7 351 aaPredicted RBP26.99■■□□□ 1.91
PCNX1-206ENST00000554292 ANKRD53Q8N9V6 530 aa26.99■■□□□ 1.91
PCNX1-206ENST00000554292 ADAMTS17Q8TE56 1095 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms