RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 AGAP14A8MT82 685 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 LOC730098B7Z3J9 87 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 SHOXO15266 292 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 DFNA5O60443 496 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 FAM20BO75063 409 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 SOCS5O75159 536 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 DBTP11182 482 aaKnown RBP11.84□□□□□ -0.51
SHMT2-207ENST00000553837 GLULP15104 373 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 ITGB8P26012 769 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 HLA-FP30511 346 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 DSTNP60981 165 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 PTSQ03393 145 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 STARD3Q14849 445 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 NKG7Q16617 165 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 ATP13A5Q4VNC0 1218 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 CAPN13Q6MZZ7 669 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-207ENST00000553837 TMEM179BQ7Z7N9 219 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 PSD4Q8NDX1 1056 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 OR2AP1Q8NGE2 309 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 OR52E4Q8NGH9 312 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 JPH3Q8WXH2 748 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-207ENST00000553837 FCGR1BQ92637 280 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 ST6GAL2Q96JF0 529 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 IKZF5Q9H5V7 419 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 WWOXQ9NZC7 414 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 VAPAQ9P0L0 249 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 TBX21Q9UL17 535 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 CCL26Q9Y258 94 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 BTBD3Q9Y2F9 522 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 SCELO95171 688 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 IGSF6O95976 241 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 MSH3P20585 1137 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 IGFBP5P24593 272 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 CCR7P32248 378 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 RGS4P49798 205 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 SLC7A9P82251 487 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 SPANXN2Q5MJ10 180 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 SUSD1Q6UWL2 747 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 MSRB3Q8IXL7 192 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 CPXM2Q8N436 756 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 KRTCAP2Q8N6L1 136 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 POP5Q969H6 163 aaKnown RBP11.84□□□□□ -0.51
SHMT2-207ENST00000553837 FAM162AQ96A26 154 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 MTFMTQ96DP5 389 aaKnown RBP11.84□□□□□ -0.51
SHMT2-207ENST00000553837 ZFYVE19Q96K21 471 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 HTATIP2Q9BUP3 242 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 SLC46A2Q9BY10 475 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 MKRN2Q9H000 416 aaKnown RBP11.84□□□□□ -0.51
SHMT2-207ENST00000553837 RNF208Q9H0X6 261 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 MAGIXQ9H6Y5 334 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 ZFP14Q9HCL3 533 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 ATP13A2Q9NQ11 1180 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 RPRD1BQ9NQG5 326 aaKnown RBP11.84□□□□□ -0.51
SHMT2-207ENST00000553837 GIMAP4Q9NUV9 329 aa11.84□□□□□ -0.51
SHMT2-207ENST00000553837 PAQR5Q9NXK6 330 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-207ENST00000553837 CCDC59Q9P031 241 aaKnown RBP11.84□□□□□ -0.51
SHMT2-207ENST00000553837 LSM7Q9UK45 103 aaKnown RBP11.84□□□□□ -0.51
SHMT2-207ENST00000553837 LEFTY2O00292 366 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 CAPN5O15484 640 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-207ENST00000553837 PFKLP17858 780 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 ETV6P41212 452 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 CCR2P41597 374 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 AP2S1P53680 142 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-207ENST00000553837 SIM2Q14190 667 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-207ENST00000553837 MPPE1Q53F39 396 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 RGL4Q8IZJ4 473 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 NLGN4XQ8N0W4 816 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 CBARPQ8N350 705 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-207ENST00000553837 LINC00469Q8N7U9 141 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 VPS37AQ8NEZ2 397 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 KBTBD8Q8NFY9 601 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 UBTD2Q8WUN7 234 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 ECHDC3Q96DC8 303 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 LYSMD1Q96S90 227 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 CCDC32Q9BV29 185 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 CDADC1Q9BWV3 514 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 TRIM39Q9HCM9 518 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 LATS2Q9NRM7 1088 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 SLC6A13Q9NSD5 602 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 HECAQ9UBI9 543 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-207ENST00000553837 FBXO10Q9UK96 956 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 RNF6Q9Y252 685 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 GMPPBQ9Y5P6 360 aa11.83□□□□□ -0.52
SHMT2-207ENST00000553837 HMX3A6NHT5 357 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 MANBAO00462 879 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 KCNJ13O60928 360 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 LCKP06239 509 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 YES1P07947 543 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 TRAPPC2P0DI81 140 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 TRAPPC2BP0DI82 140 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 CFL1P23528 166 aaKnown RBP11.82□□□□□ -0.52
SHMT2-207ENST00000553837 SERPINA4P29622 427 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 CTSKP43235 329 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 PRIM2P49643 509 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 VEGFBP49765 207 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 CSNK2BP67870 215 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 PPP1R8Q12972 351 aaKnown RBP11.82□□□□□ -0.52
SHMT2-207ENST00000553837 GBX1Q14549 363 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 GPR33Q49SQ1 333 aa11.82□□□□□ -0.52
SHMT2-207ENST00000553837 GTDC1Q4AE62 458 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms