RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SMAD6O43541 496 aaKnown RBP4.56□□□□□ -1.68
SCFD1-209ENST00000553280 NTN1O95631 604 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 CCDC192P0DO97 292 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 DARSP14868 501 aaKnown RBP4.56□□□□□ -1.68
SCFD1-209ENST00000553280 ETS1P14921 441 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 CPA3P15088 417 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 FERP16591 822 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 GPC3P51654 580 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 HTD2P86397 168 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 LCP2Q13094 533 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 KEAP1Q14145 624 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 INAQ16352 499 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 ZC2HC1CQ53FD0 456 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-209ENST00000553280 ZNF542PQ5EBM4 170 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 XKR6Q5GH73 641 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 TECRLQ5HYJ1 363 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 NADSYN1Q6IA69 706 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 PRSS57Q6UWY2 283 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 B3GLCTQ6Y288 498 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 FOXL2NBQ6ZUU3 175 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 RBM23Q86U06 439 aaKnown RBP4.56□□□□□ -1.68
SCFD1-209ENST00000553280 NFE4Q86UQ8 179 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 TMEM99Q8N816 258 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 LRTM2Q8N967 370 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 SIDT2Q8NBJ9 832 aaKnown RBP4.56□□□□□ -1.68
SCFD1-209ENST00000553280 OR13A1Q8NGR1 328 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 NUDCD2Q8WVJ2 157 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 SLCO4A1Q96BD0 722 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 C4orf45Q96LM5 186 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 BTBD9Q96Q07 612 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 RPF1Q9H9Y2 349 aaKnown RBP4.56□□□□□ -1.68
SCFD1-209ENST00000553280 ZCCHC3Q9NUD5 404 aaKnown RBP4.56□□□□□ -1.68
SCFD1-209ENST00000553280 INTS10Q9NVR2 710 aaKnown RBP4.56□□□□□ -1.68
SCFD1-209ENST00000553280 FAM118AQ9NWS6 357 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 TAS2R3Q9NYW6 316 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 FLRT3Q9NZU0 649 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 KCNN3Q9UGI6 736 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 IL36AQ9UHA7 158 aa4.56□□□□□ -1.68
SCFD1-209ENST00000553280 FAF1Q9UNN5 650 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-209ENST00000553280 PLSCR5A0PG75 271 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 H3BMM5 538 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 HSF2BPO75031 334 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 GLRA3O75311 464 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 GRAP2O75791 330 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 DFFBO76075 338 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 TSHBP01222 138 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 AREGP15514 252 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 UGT1A6P19224 532 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 ACP1P24666 158 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 HPDP32754 393 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-209ENST00000553280 CLCN4P51793 760 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 CNN1P51911 297 aaKnown RBP4.55□□□□□ -1.68
SCFD1-209ENST00000553280 CLDN17P56750 224 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 HUNKP57058 714 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 GALK2Q01415 458 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 SLC3A1Q07837 685 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 ILF3Q12906 894 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCFD1-209ENST00000553280 CD164L2Q6UWJ8 174 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCFD1-209ENST00000553280 G2E3Q7L622 706 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 COX8CQ7Z4L0 72 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 NLRP14Q86W24 1093 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 THEM5Q8N1Q8 247 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 FBXW8Q8N3Y1 598 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 GBP7Q8N8V2 638 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-209ENST00000553280 ZNF383Q8NA42 475 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 DMBX1Q8NFW5 382 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 OR7A2PQ8NGA2 310 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 OR13C3Q8NGS6 347 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 RFT1Q96AA3 541 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 LGALS12Q96DT0 336 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 ZNF577Q9BSK1 485 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 WACQ9BTA9 647 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 NYXQ9GZU5 481 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 CARD9Q9H257 536 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 C6orf106Q9H6K1 298 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-209ENST00000553280 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCFD1-209ENST00000553280 SPASTQ9UBP0 616 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 DNPEPQ9ULA0 475 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 TNNQ9UQP3 1299 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 ATP6V0A2Q9Y487 856 aa4.55□□□□□ -1.68
SCFD1-209ENST00000553280 SLC15A5A6NIM6 579 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 E5RGE8 158 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 SLC22A2O15244 555 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 MAGEB2O15479 319 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 PSMD3O43242 534 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 CDK2AP2O75956 126 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 GAS8O95995 478 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 CETPP11597 493 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 CYP3A5P20815 502 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 SRD5A2P31213 254 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 SFNP31947 248 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 NR0B1P51843 470 aaKnown RBP4.54□□□□□ -1.68
SCFD1-209ENST00000553280 KRTAP10-9P60411 292 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 GK2Q14410 553 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-209ENST00000553280 RBM39Q14498 530 aaKnown RBP4.54□□□□□ -1.68
SCFD1-209ENST00000553280 SQLEQ14534 574 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 SLC25A53Q5H9E4 307 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 BTN2A1Q7KYR7 527 aa4.54□□□□□ -1.68
SCFD1-209ENST00000553280 ADAMTSL2Q86TH1 951 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms