RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 DRGXA6NNA5 263 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 WNT9AO14904 365 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 TEX28O15482 410 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 TIMP1P01033 207 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 CHRM5P08912 532 aaPredicted RBP11.94□□□□□ -0.5
HDAC7-230ENST00000552960 ITPKAP23677 461 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 TUFMP49411 452 aaKnown RBP11.94□□□□□ -0.5
HDAC7-230ENST00000552960 ARMC12Q5T9G4 340 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 TXNDC8Q6A555 127 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 NEK10Q6ZWH5 1172 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 CALHM3Q86XJ0 350 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 SYT12Q8IV01 421 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 CYP4Z2PQ8N1L4 340 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 KBTBD8Q8NFY9 601 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 GGHQ92820 318 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 MYDGFQ969H8 173 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 ZNF558Q96NG5 402 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 PRRG3Q9BZD7 231 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 RPS6KA6Q9UK32 745 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 CENPXA8MT69 81 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 GFRA2O00451 464 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 COX7A2P14406 83 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 SYN1P17600 705 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 DGKAP23743 735 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 GKP32189 559 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 SOX6P35712 828 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 SLC15A1P46059 708 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 SMARCB1Q12824 385 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 ATAD3CQ5T2N8 411 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 RNF219Q5W0B1 726 aaPredicted RBP11.94□□□□□ -0.5
HDAC7-230ENST00000552960 ADGRG2Q8IZP9 1017 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 DEPDC4Q8N2C3 294 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 CITED4Q96RK1 184 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 TMEM45AQ9NWC5 275 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 MOSPD1Q9UJG1 213 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 DUSP12Q9UNI6 340 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 FCF1Q9Y324 198 aaKnown RBP11.94□□□□□ -0.5
HDAC7-230ENST00000552960 TRBV5-3A0A0A0MS03 114 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.94□□□□□ -0.5
HDAC7-230ENST00000552960 PRRG1O14668 218 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 KIAA0513O60268 411 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 ABLIM3O94929 683 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 IGLV3-27P01718 113 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 SDC1P18827 310 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 EN2P19622 333 aaPredicted RBP11.94□□□□□ -0.5
HDAC7-230ENST00000552960 CLCN4P51793 760 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 ZNF45Q02386 682 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 CACNG1Q06432 222 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 HSPA14Q0VDF9 509 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 FADDQ13158 208 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 ZNF177Q13360 481 aaPredicted RBP11.94□□□□□ -0.5
HDAC7-230ENST00000552960 AGAP6Q5VW22 663 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 STK40Q8N2I9 435 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 GTPBP3Q969Y2 492 aaKnown RBP11.94□□□□□ -0.5
HDAC7-230ENST00000552960 EID2BQ96D98 161 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 AGAP4Q96P64 663 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 SMG9Q9H0W8 520 aaKnown RBP11.94□□□□□ -0.5
HDAC7-230ENST00000552960 PLSCR3Q9NRY6 295 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 GIMAP4Q9NUV9 329 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 RLIMQ9NVW2 624 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 SPASTQ9UBP0 616 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 RAPGEFL1Q9UHV5 662 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 HSPE1-MOB4S4R3N1 261 aa11.94□□□□□ -0.5
HDAC7-230ENST00000552960 ATP5C1P36542 298 aaKnown RBP11.93□□□□□ -0.5
HDAC7-230ENST00000552960 RPIAP49247 311 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 GZMMP51124 257 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 CDH12P55289 794 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 CLDN8P56748 225 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 MXD1Q05195 221 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 TSTQ16762 297 aaKnown RBP11.93□□□□□ -0.5
HDAC7-230ENST00000552960 SNAP47Q5SQN1 464 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 GALNT13Q8IUC8 556 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 TRNT1Q96Q11 434 aaKnown RBP11.93□□□□□ -0.5
HDAC7-230ENST00000552960 TMEM246Q9BRR3 403 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 CNPPD1Q9BV87 410 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 ATG10Q9H0Y0 220 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 MAGEH1Q9H213 219 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 TMEM184CQ9NVA4 438 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 PAQR5Q9NXK6 330 aaPredicted RBP11.93□□□□□ -0.5
HDAC7-230ENST00000552960 RIMKLBQ9ULI2 386 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 PLXNA3P51805 1871 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 VCANP13611 3396 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 MAGEB17A8MXT2 336 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 H3BM21 787 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 TNFRSF11BO00300 401 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 WDR47O94967 919 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 KCNK5O95279 499 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 C9P02748 559 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 MAGEA2P43356 314 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 CYP4F8P98187 520 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 CLPPQ16740 277 aaPredicted RBP11.93□□□□□ -0.5
HDAC7-230ENST00000552960 DNAJB7Q7Z6W7 309 aaPredicted RBP11.93□□□□□ -0.5
HDAC7-230ENST00000552960 HS6ST3Q8IZP7 471 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 CACTIN-AS1Q8N1I8 211 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 SLC5A8Q8N695 610 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 IL17RDQ8NFM7 739 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 VANGL1Q8TAA9 524 aaPredicted RBP11.93□□□□□ -0.5
HDAC7-230ENST00000552960 NELL1Q92832 810 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 FATE1Q969F0 183 aa11.93□□□□□ -0.5
HDAC7-230ENST00000552960 OR5M11Q96RB7 305 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms