RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 DUSP26Q9BV47 211 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 MS4A8Q9BY19 250 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 TRIT1Q9H3H1 467 aaKnown RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 WDR26Q9H7D7 661 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 KIR3DX1Q9H7L2 352 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 MBNL1Q9NR56 388 aaKnown RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 SERGEFQ9UGK8 458 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 SAMD4AQ9UPU9 718 aaKnown RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 TMEM265A0A087WTH1 108 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 A8MVJ9 347 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 TNFRSF10CO14798 259 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 TPD52L2O43399 206 aaKnown RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 GPR37L1O60883 481 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 H6PDO95479 791 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 ALPLP05186 524 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 TFAP2AP05549 437 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 NCK1P16333 377 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 TSFMP43897 325 aaKnown RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 RPL5P46777 297 aaKnown RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 PXNP49023 591 aaPredicted RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 ADPRHP54922 357 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 ABATP80404 500 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 SLBPQ14493 270 aaKnown RBP eCLIP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 VMACQ2NL98 169 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 POM121L1PQ3SYA9 428 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 SGO1Q5FBB7 561 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 C6orf52Q5T4I8 152 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 AMIGO2Q86SJ2 522 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 SLC9B2Q86UD5 537 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 CBR4Q8N4T8 237 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 IL17RCQ8NAC3 791 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 ZFPM2Q8WW38 1151 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 CNDP2Q96KP4 475 aaKnown RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 CIB1Q99828 191 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 GPR27Q9NS67 375 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 ATAD3AQ9NVI7 634 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 SMPD3Q9NY59 655 aaPredicted RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.59□□□□□ -0.87
RAB5B-206ENST00000549505 TRANK1O15050 2925 aa9.59□□□□□ -0.87
RAB5B-206ENST00000549505 TMEM229AB2RXF0 380 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 FPGTO14772 594 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 TNFRSF21O75509 655 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 FUCA1P04066 466 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 DDX5P17844 614 aaKnown RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 IGFALSP35858 605 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 CAPGP40121 348 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 ARL1P40616 181 aaPredicted RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 RXRGP48443 463 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 RPS13P62277 151 aaKnown RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 CHRNB3Q05901 458 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 SLC44A4Q53GD3 710 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 CATSPEREQ5SY80 951 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 OR4F3Q6IEY1 312 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 ABRAXAS1Q6UWZ7 409 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 EIF3MQ7L2H7 374 aaKnown RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 COMMD6Q7Z4G1 85 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 C10orf111Q8N326 155 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 HDDC3Q8N4P3 179 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 C1orf52Q8N6N3 182 aaKnown RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 TTLQ8NG68 377 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 B4GALNT2Q8NHY0 566 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 C16orf78Q8WTQ4 265 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 TSSK3Q96PN8 268 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 OAZ3Q9UMX2 235 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 HEBP2Q9Y5Z4 205 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 KRT87PA6NCN2 255 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 SHISA7A6NL88 538 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 CLIC1O00299 241 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 PCDH7O60245 1069 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 CLEC3AO75596 197 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 APBB3O95704 486 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 ANXA4P09525 319 aaPredicted RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 CTHP32929 405 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 RPS9P46781 194 aaKnown RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 FADDQ13158 208 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 IL18R1Q13478 541 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 MLF2Q15773 248 aaPredicted RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 GTDC1Q4AE62 458 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 CPTPQ5TA50 214 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 DEPDC1Q5TB30 811 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 PATL1Q86TB9 770 aaKnown RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 OR7A2PQ8NGA2 310 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 MED8Q96G25 268 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 ADI1Q9BV57 179 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 SLC17A9Q9BYT1 436 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 PRO3102Q9H379 93 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 RAD21L1Q9H4I0 556 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 IL1RAPQ9NPH3 570 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 BTBD3Q9Y2F9 522 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 TRBC2A0A5B9 178 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 CSPG5O95196 566 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 UBTFL6P0CB48 400 aaPredicted RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 LAMP1P11279 417 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 CKMT2P17540 419 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 BSGP35613 385 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 DAG1Q14118 895 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 TMEM35AQ53FP2 167 aa9.58□□□□□ -0.88
RAB5B-206ENST00000549505 SHQ1Q6PI26 577 aaKnown RBP9.58□□□□□ -0.88
RAB5B-206ENST00000549505 TMIGD1Q6UXZ0 262 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms