RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 E9PLN8 166 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 MYO1CO00159 1063 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 TTI1O43156 1089 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 PRPF4O43172 522 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX54-206ENST00000549271 SERPINA7P05543 415 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 COX6A1P12074 109 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 PGAM1P18669 254 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 GABRB3P28472 473 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 CMPK1P30085 196 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 MPP1Q00013 466 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 TIAL1Q01085 375 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX54-206ENST00000549271 TFF3Q07654 80 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 DSG2Q14126 1118 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 CRYMQ14894 314 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 ARHGAP19Q14CB8 494 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 PCOLCEQ15113 449 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 KLHL38Q2WGJ6 581 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 GARNL3Q5VVW2 1013 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 HIBCHQ6NVY1 386 aaPredicted RBP11.53□□□□□ -0.56
DDX54-206ENST00000549271 CNSTQ6PJW8 725 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 CYHR1Q6ZMK1 362 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 SYDE1Q6ZW31 735 aaPredicted RBP11.53□□□□□ -0.56
DDX54-206ENST00000549271 NDUFAF7Q7L592 441 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 BIVMQ86UB2 503 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 DMRTC2Q8IXT2 367 aaPredicted RBP11.53□□□□□ -0.56
DDX54-206ENST00000549271 LMNTD2Q8IXW0 634 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 C17orf53Q8N3J3 647 aaPredicted RBP11.53□□□□□ -0.56
DDX54-206ENST00000549271 DTWD1Q8N5C7 304 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 METTL27Q8N6F8 245 aaPredicted RBP11.53□□□□□ -0.56
DDX54-206ENST00000549271 OR9A1PQ8NGU1 263 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 SUN3Q8TAQ9 357 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 AGAP11Q8TF27 550 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 SKA2Q8WVK7 121 aaPredicted RBP11.53□□□□□ -0.56
DDX54-206ENST00000549271 VKORC1Q9BQB6 163 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 ZNF559Q9BR84 538 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 PLCD4Q9BRC7 762 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 WDR83Q9BRX9 315 aaKnown RBP11.53□□□□□ -0.56
DDX54-206ENST00000549271 TRIM51Q9BSJ1 452 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 DPH7Q9BTV6 452 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 TGIF2Q9GZN2 237 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 IARS2Q9NSE4 1012 aaKnown RBP11.53□□□□□ -0.56
DDX54-206ENST00000549271 C14orf105Q9NVL8 296 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 KLHL42Q9P2K6 505 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 KCNN3Q9UGI6 736 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 TSR3Q9UJK0 312 aaKnown RBP11.53□□□□□ -0.56
DDX54-206ENST00000549271 DHRS7Q9Y394 339 aa11.53□□□□□ -0.56
DDX54-206ENST00000549271 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX54-206ENST00000549271 LOC102723996A0A087X1L8 192 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 ARHGEF33A8MVX0 844 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 KIAA1324LA8MWY0 1029 aaPredicted RBP11.52□□□□□ -0.57
DDX54-206ENST00000549271 H0YGG7 62 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 CCDC188H7C350 402 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 NRP2O60462 931 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 VPS26AO75436 327 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 PSIP1O75475 530 aaKnown RBP11.52□□□□□ -0.57
DDX54-206ENST00000549271 MYBL2P10244 700 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 ERVK-10P10266 1014 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 FBLP22087 321 aaKnown RBP11.52□□□□□ -0.57
DDX54-206ENST00000549271 HSD17B2P37059 387 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 SLC26A3P40879 764 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 EMP2P54851 167 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 ARF3P61204 181 aaPredicted RBP11.52□□□□□ -0.57
DDX54-206ENST00000549271 DR1Q01658 176 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 FASTKQ14296 549 aaKnown RBP11.52□□□□□ -0.57
DDX54-206ENST00000549271 MORF4L2Q15014 288 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 CEBPEQ15744 281 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 BBS9Q3SYG4 887 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.52□□□□□ -0.57
DDX54-206ENST00000549271 RIPOR1Q6ZS17 1223 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 NEK10Q6ZWH5 1172 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 LAPTM4BQ86VI4 370 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 PAQR7Q86WK9 346 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 DOLPP1Q86YN1 238 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 CHERPQ8IWX8 916 aaKnown RBP11.52□□□□□ -0.57
DDX54-206ENST00000549271 ARHGEF39Q8N4T4 335 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 C2CD4AQ8NCU7 369 aaPredicted RBP11.52□□□□□ -0.57
DDX54-206ENST00000549271 CALML6Q8TD86 181 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 SMPDL3AQ92484 453 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 KCNJ9Q92806 393 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 RUNDC3BQ96NL0 473 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 AARSD1Q9BTE6 412 aaKnown RBP11.52□□□□□ -0.57
DDX54-206ENST00000549271 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 SCN2AQ99250 2005 aa11.52□□□□□ -0.57
DDX54-206ENST00000549271 IGHV1-45A0A0A0MS14 117 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 IGKV1-8A0A0C4DH67 115 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 IDSB3KWA1 339 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 E5RI56 91 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 GFYI3L273 518 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 TXNDC9O14530 226 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 TTC4O95801 387 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 AHSGP02765 367 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 EIF2S1P05198 315 aaKnown RBP11.51□□□□□ -0.57
DDX54-206ENST00000549271 CELA2AP08217 269 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 CXCR2P25025 360 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 MSX1P28360 303 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 ELK3P41970 407 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 PAFAH1B1P43034 410 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 ITGA8P53708 1063 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 AP2B1P63010 937 aa11.51□□□□□ -0.57
DDX54-206ENST00000549271 YBX1P67809 324 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms