RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SLC32A1Q9H598 525 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 TAS2R9Q9NYW1 312 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 PIKFYVEQ9Y2I7 2098 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.25□□□□□ -0.29
HDAC7-228ENST00000548938 SUV39H1O43463 412 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 CLDN11O75508 207 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 ARHGEF15O94989 841 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 ANXA5P08758 320 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 COX7A2P14406 83 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 ZNF177Q13360 481 aaPredicted RBP13.25□□□□□ -0.29
HDAC7-228ENST00000548938 MBTPS1Q14703 1052 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 STARD3Q14849 445 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 MED22Q15528 200 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 ZNF517Q6ZMY9 492 aaPredicted RBP13.25□□□□□ -0.29
HDAC7-228ENST00000548938 B3GNT7Q8NFL0 401 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 CCDC32Q9BV29 185 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 TPT1P8Q9HAU6 139 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 RDH14Q9HBH5 336 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 PLSCR3Q9NRY6 295 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 LHX3Q9UBR4 397 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 CFL2Q9Y281 166 aa13.25□□□□□ -0.29
HDAC7-228ENST00000548938 CFAP20Q9Y6A4 193 aaKnown RBP13.25□□□□□ -0.29
HDAC7-228ENST00000548938 FZD6O60353 706 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 PRAMEF4O60810 478 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 OPN1SWP03999 348 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 ACRV1P26436 265 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 TNFSF8P32971 234 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 RFX2P48378 723 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 RPIAP49247 311 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 VEGFBP49765 207 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 CDK10Q15131 360 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 SF1Q15637 639 aaKnown RBP13.24□□□□□ -0.29
HDAC7-228ENST00000548938 ZMAT1Q5H9K5 638 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 PRAMEF9Q5VWM5 478 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 TRAF7Q6Q0C0 670 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 GALNT12Q8IXK2 581 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 CPA6Q8N4T0 437 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 SH3KBP1Q96B97 665 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 DEPDC7Q96QD5 511 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 TTYH2Q9BSA4 534 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 TSEN34Q9BSV6 310 aaKnown RBP13.24□□□□□ -0.29
HDAC7-228ENST00000548938 IL26Q9NPH9 171 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 TRPV5Q9NQA5 729 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 MS4A12Q9NXJ0 267 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 NDUFAF4Q9P032 175 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 TMA7Q9Y2S6 64 aaKnown RBP13.24□□□□□ -0.29
HDAC7-228ENST00000548938 FCF1Q9Y324 198 aaKnown RBP13.24□□□□□ -0.29
HDAC7-228ENST00000548938 KLK4Q9Y5K2 254 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 LINC00854A0A1B0GVQ3 168 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 A0A1W2PQ45 241 aaPredicted RBP13.24□□□□□ -0.29
HDAC7-228ENST00000548938 A0A1W2PQY0 241 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 CENPBD1B2RD01 187 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 DPM1O60762 260 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 GJB5O95377 273 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 ITGALP20701 1170 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 PRPS1L1P21108 318 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 AZGP1P25311 298 aaKnown RBP13.24□□□□□ -0.29
HDAC7-228ENST00000548938 PXNP49023 591 aaPredicted RBP13.24□□□□□ -0.29
HDAC7-228ENST00000548938 SLC11A2P49281 568 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 OLR1P78380 273 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 VEZF1Q14119 521 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 LRRC66Q68CR7 880 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 METTL2BQ6P1Q9 378 aaKnown RBP13.24□□□□□ -0.29
HDAC7-228ENST00000548938 ATCAYQ86WG3 371 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 MGLLQ99685 303 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 TMEM246Q9BRR3 403 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 SMURF1Q9HCE7 757 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
HDAC7-228ENST00000548938 IMPAD1Q9NX62 359 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 CRLS1Q9UJA2 301 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 FZD4Q9ULV1 537 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 DUSP12Q9UNI6 340 aa13.24□□□□□ -0.29
HDAC7-228ENST00000548938 CENPXA8MT69 81 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 NOTOA8MTQ0 251 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 ARHGAP33O14559 1287 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 SLITRK5O94991 958 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 KLKB1P03952 638 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 LAMP1P11279 417 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 PRPH2P23942 346 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 MZF1P28698 734 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-228ENST00000548938 CDH12P55289 794 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 ABRQ12979 859 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 CSTF3Q12996 717 aaKnown RBP13.23□□□□□ -0.29
HDAC7-228ENST00000548938 BOP1Q14137 746 aaKnown RBP13.23□□□□□ -0.29
HDAC7-228ENST00000548938 ZNF648Q5T619 568 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-228ENST00000548938 CXorf57Q6NSI4 855 aaKnown RBP13.23□□□□□ -0.29
HDAC7-228ENST00000548938 ZNF367Q7RTV3 350 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 RTN4RL1Q86UN2 441 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-228ENST00000548938 TMCO6Q96DC7 493 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 MYO19Q96H55 970 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 TRNT1Q96Q11 434 aaKnown RBP13.23□□□□□ -0.29
HDAC7-228ENST00000548938 MUTYHQ9UIF7 546 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 PADI2Q9Y2J8 665 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 A8MX80 341 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 RGS5O15539 181 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 GCM2O75603 506 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-228ENST00000548938 GPX5O75715 221 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 VNN2O95498 520 aa13.23□□□□□ -0.29
HDAC7-228ENST00000548938 GNRH1P01148 92 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms