RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 H2AFJQ9BTM1 129 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 DPEP2Q9H4A9 486 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 IPPKQ9H8X2 491 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 TRIM39Q9HCM9 518 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 RIC8BQ9NVN3 520 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 SLC39A1Q9NY26 324 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 TRPS1Q9UHF7 1281 aa19.21■□□□□ 0.67
CTDSP2-204ENST00000548823 A0A1B0GTL3 188 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 PABPN1LA6NDY0 278 aaKnown RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 A8MUI8 341 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 B4DGG1 531 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 PSMD12O00232 456 aaPredicted RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 VEGFDO43915 354 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 MTX2O75431 263 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 KATNA1O75449 491 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 PSIP1O75475 530 aaKnown RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 STK16O75716 305 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 GUCA1CO95843 209 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 EBLN1P0CF75 366 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 ITGAXP20702 1163 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 CCND1P24385 295 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 MAP4P27816 1152 aaKnown RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 ALDH4A1P30038 563 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 PRDX3P30048 256 aaKnown RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 GPR1P46091 355 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 HSPA7P48741 367 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 OR1D5P58170 312 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 STX1BP61266 288 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 PLOD1Q02809 727 aaPredicted RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 STX5Q13190 355 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 CUL3Q13618 768 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 BOP1Q14137 746 aaKnown RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 INPP5AQ14642 412 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 WSCD2Q2TBF2 565 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 ZNF658BQ4V348 819 aaPredicted RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 DCAF12Q5T6F0 453 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 PGM2L1Q6PCE3 622 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 C16orf89Q6UX73 402 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 ADAMTSL4Q6UY14 1074 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 MAMDC2Q7Z304 686 aaPredicted RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 NET1Q7Z628 596 aaPredicted RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 DDIASQ8IXT1 998 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 KLHDC8AQ8IYD2 350 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 NLGN4XQ8N0W4 816 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 NLGN4YQ8NFZ3 816 aaPredicted RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 ESAMQ96AP7 390 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 PDXPQ96GD0 296 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 DENND2DQ9H6A0 471 aaPredicted RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 EFCAB1Q9HAE3 211 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 POLG2Q9UHN1 485 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 PRPF19Q9UMS4 504 aaKnown RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 G3BP2Q9UN86 482 aaKnown RBP19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 OR1A2Q9Y585 309 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 ANGPTL3Q9Y5C1 460 aa19.2■□□□□ 0.66
CTDSP2-204ENST00000548823 A0A088AWK7 358 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 LOC101059948A0A1B0GTJ6 334 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 C17orf113A0A1B0GUU1 675 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 MKRN2OSH3BPM6 223 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 K7EM74 188 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 LIN7AO14910 233 aaPredicted RBP19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 CCNT2O60583 730 aaKnown RBP19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 COL8A1P27658 744 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 CSTF2P33240 577 aaKnown RBP eCLIP19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 CCNG1P51959 295 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 CTSCP53634 463 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 RAB15P59190 212 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 SLC25A3Q00325 362 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 FASTKQ14296 549 aaKnown RBP19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 NR1D2Q14995 579 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 SMU1Q2TAY7 513 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 TRMT5Q32P41 509 aaKnown RBP19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 FBXO48Q5FWF7 155 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 C6orf163Q5TEZ5 329 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 LETMD1Q6P1Q0 360 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 TMEM220Q6QAJ8 160 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 ZNF438Q7Z4V0 828 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 VRK3Q8IV63 474 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 ULK2Q8IYT8 1036 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 SLC22A15Q8IZD6 547 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 FBXO15Q8NCQ5 510 aaPredicted RBP19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 OR4F6Q8NGB9 312 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 TSPEARQ8WU66 669 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 FBXL8Q96CD0 374 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 MAGEB10Q96LZ2 347 aaPredicted RBP19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 THTPAQ9BU02 230 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 ARL15Q9NXU5 204 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 TSR3Q9UJK0 312 aaKnown RBP19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 COQ6Q9Y2Z9 468 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 OR2AG2A6NM03 316 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 B4E171 279 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 CIB2O75838 187 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 EPB42P16452 691 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 TSPAN7P41732 249 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 SLC6A12P48065 614 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 C18orf21Q32NC0 220 aaPredicted RBP19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 RAET1GQ6H3X3 334 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 ASB18Q6ZVZ8 466 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 MILR1Q7Z6M3 343 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 ADGRG6Q86SQ4 1221 aa19.19■□□□□ 0.66
CTDSP2-204ENST00000548823 OR4D9Q8NGE8 314 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms