RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 UBOX5O94941 541 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 ANKRD34CP0C6C1 535 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 LINC00032P0C843 101 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 NPPBP16860 134 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 NCF2P19878 526 aaPredicted RBP16.67■□□□□ 0.26
HDAC7-227ENST00000548080 IRF8Q02556 426 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 CHIT1Q13231 466 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 EIF3IQ13347 325 aaKnown RBP16.67■□□□□ 0.26
HDAC7-227ENST00000548080 GALNTL6Q49A17 601 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 SPDYAQ5MJ70 313 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 TCHHL1Q5QJ38 904 aaPredicted RBP16.67■□□□□ 0.26
HDAC7-227ENST00000548080 LIPJQ5W064 366 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 SUSD1Q6UWL2 747 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 YTHDF3Q7Z739 585 aaKnown RBP16.67■□□□□ 0.26
HDAC7-227ENST00000548080 MYLK4Q86YV6 388 aaPredicted RBP16.67■□□□□ 0.26
HDAC7-227ENST00000548080 BMPERQ8N8U9 685 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 FLVCR1-AS1Q8TAF5 88 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 KLHL6Q8WZ60 621 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 SMPDL3AQ92484 453 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 NAF1Q96HR8 494 aaKnown RBP16.67■□□□□ 0.26
HDAC7-227ENST00000548080 C3orf30Q96M34 536 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 RAB11FIP5Q9BXF6 653 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 SAR1AQ9NR31 198 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 SIDT1Q9NXL6 827 aaKnown RBP16.67■□□□□ 0.26
HDAC7-227ENST00000548080 OR6C2Q9NZP2 312 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 PCDHGA8Q9Y5G5 932 aa16.67■□□□□ 0.26
HDAC7-227ENST00000548080 ACACAQ13085 2346 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 KCNE1BA0A087WTH5 132 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 C9orf172C9J069 976 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 MANBAO00462 879 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 PRAMEF4O60810 478 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 WFS1O76024 890 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 FOLR1P15328 257 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 GNAZP19086 355 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 SLC5A2P31639 672 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 CASP2P42575 452 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 ARL4DP49703 201 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 YBX1P67809 324 aaKnown RBP16.66■□□□□ 0.26
HDAC7-227ENST00000548080 GPR19Q15760 415 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 XKR6Q5GH73 641 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 PRAMEF9Q5VWM5 478 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 FAM91A1Q658Y4 838 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 SCIMPQ6UWF3 145 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 LCTLQ6UWM7 567 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 RNF165Q6ZSG1 346 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 LARP4Q71RC2 724 aaKnown RBP eCLIP16.66■□□□□ 0.26
HDAC7-227ENST00000548080 CD180Q99467 661 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 HAUS8Q9BT25 410 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 ACAT2Q9BWD1 397 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 PCBD2Q9H0N5 130 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 AKTIPQ9H8T0 292 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 WDR70Q9NW82 654 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 PTGDR2Q9Y5Y4 395 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 B3GALT1Q9Y5Z6 326 aa16.66■□□□□ 0.26
HDAC7-227ENST00000548080 CELSR3Q9NYQ7 3312 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 ATP6AP2A0A1C7CYW4 349 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 E7EQ34 232 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 TAF4O00268 1085 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 FFAR3O14843 346 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 GPR42O15529 346 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 ULK1O75385 1050 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 ATP6AP2O75787 350 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 KRT6AP02538 564 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 KRT6BP04259 564 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 NELFEP18615 380 aaKnown RBP16.65■□□□□ 0.26
HDAC7-227ENST00000548080 HNF4AP41235 474 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 KRT6CP48668 564 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 HTR6P50406 440 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 DOC2AQ14183 400 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 ZIC1Q15915 447 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 TBC1D25Q3MII6 688 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 XKR7Q5GH72 579 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 THEMIS2Q5TEJ8 643 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 PRAMEF13Q5VWM6 474 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 HMGCLL1Q8TB92 370 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 TUBGCP3Q96CW5 907 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 SLC41A2Q96JW4 573 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 TRAPPC9Q96Q05 1148 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 OR6C1Q96RD1 312 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 RIC8BQ9NVN3 520 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 SNX6Q9UNH7 406 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 RAXQ9Y2V3 346 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 SDK2Q58EX2 2172 aa16.65■□□□□ 0.26
HDAC7-227ENST00000548080 PCM1Q15154 2024 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 SPTBP11277 2137 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 DMXL2Q8TDJ6 3036 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 A0A1W2PPV9 198 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 CDRT15L2A8MXV6 281 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 TOX3O15405 576 aaPredicted RBP16.64■□□□□ 0.25
HDAC7-227ENST00000548080 DXOO77932 396 aaKnown RBP16.64■□□□□ 0.25
HDAC7-227ENST00000548080 MC2RQ01718 297 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 UBAP2LQ14157 1087 aaKnown RBP16.64■□□□□ 0.25
HDAC7-227ENST00000548080 E2F2Q14209 437 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 KIR2DS3Q14952 304 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 KRT72Q14CN4 511 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 ABRAXAS2Q15018 415 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 ZRSR2Q15696 482 aaKnown RBP16.64■□□□□ 0.25
HDAC7-227ENST00000548080 TBCCQ15814 346 aa16.64■□□□□ 0.25
HDAC7-227ENST00000548080 CPSF6Q16630 551 aaKnown RBP eCLIP16.64■□□□□ 0.25
HDAC7-227ENST00000548080 DEFB110Q30KQ9 67 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms