RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 BHLHE22Q8NFJ8 381 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 OR2V1Q8NHB1 315 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 OR14C36Q8NHC7 312 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CHTF18Q8WVB6 975 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 HTRA1Q92743 480 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 RPL3LQ92901 407 aaKnown RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 OTULINQ96BN8 352 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 FBXL8Q96CD0 374 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 NUDT11Q96G61 164 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 MARS2Q96GW9 593 aaKnown RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ZNF764Q96H86 408 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 HBEGFQ99075 208 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 C11orf70Q9BRQ4 267 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 DCUN1D5Q9BTE7 237 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SPON2Q9BUD6 331 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 GPR87Q9BY21 358 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ANGPTL4Q9BY76 406 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 PARD6GQ9BYG4 376 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CPEB1Q9BZB8 566 aaKnown RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 TM6SF1Q9BZW5 370 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ADAM19Q9H013 955 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 RNF32Q9H0A6 362 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ESRP2Q9H6T0 727 aaKnown RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ZFP14Q9HCL3 533 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ENTPD7Q9NQZ7 604 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 MRPL22Q9NWU5 206 aaKnown RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 TAB2Q9NYJ8 693 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 MGAT4CQ9UBM8 478 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CDH22Q9UJ99 828 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 DBR1Q9UK59 544 aaKnown RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 POFUT2Q9Y2G5 429 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 GPR55Q9Y2T6 319 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 PCDHB1Q9Y5F3 818 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CDY2AQ9Y6F7 541 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SLIT1O75093 1534 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ERVK-7P63135 1459 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 UBR1Q8IWV7 1749 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 NPHP3-ACAD11A0A0J9YXS1 232 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 A0A1B0GTH6 734 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 PLSCR5A0PG75 271 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SUPT3HB4E1H0 165 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CFLARO15519 480 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 DHX15O43143 795 aaKnown RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 DLEU1O43261 78 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ZNF821O75541 412 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 UPK1BO75841 260 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 VAPBO95292 243 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 BMP15O95972 392 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 C1QBP02746 253 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SUPT20HL2P0C7V6 817 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 HLA-EP13747 358 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 EEF1B2P24534 225 aaKnown RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ARNTP27540 789 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 THBS2P35442 1172 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 RFC3P40938 356 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 TECP42680 631 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 TGM4P49221 684 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 PRKXP51817 358 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 EPHB3P54753 998 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 EMP2P54851 167 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 AQP4P55087 323 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CDH13P55290 713 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CDH15P55291 814 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 PMP22Q01453 160 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ZP2Q05996 745 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 TNFRSF9Q07011 255 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 BNIP3Q12983 259 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 TRA2AQ13595 282 aaKnown RBP eCLIP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 COL9A2Q14055 689 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 MESDQ14696 234 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 LRRC14Q15048 493 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 MED22Q15528 200 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SLC1A5Q15758 541 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SLC10A6Q3KNW5 377 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CTXN3Q4LDR2 81 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 BCL7AQ4VC05 210 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ACTBL2Q562R1 376 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ZNF667Q5HYK9 610 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 N4BP2L1Q5TBK1 243 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 KLHDC7AQ5VTJ3 777 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 MEDAGQ5VYS4 303 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 OR6B2Q6IFH4 312 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 MRNIPQ6NTE8 343 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 C11orf63Q6NUN7 778 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CD300LGQ6UXG3 332 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 FAM151BQ6UXP7 276 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 FAM83HQ6ZRV2 1179 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ARCQ7LC44 396 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 LRRC70Q7Z2Q7 622 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 TRABD2AQ86V40 505 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 GDPD1Q8N9F7 314 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SNX33Q8WV41 574 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 EDARADDQ8WWZ3 215 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 MYLPFQ96A32 169 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 FAF2Q96CS3 445 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SENP5Q96HI0 755 aaPredicted RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 FAM210BQ96KR6 192 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 PLEKHF1Q96S99 279 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 NXF2Q9GZY0 626 aaKnown RBP4.99□□□□□ -1.61
UBE4A-203ENST00000545354 DUSP15Q9H1R2 295 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms